Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0595 ATGGGAAACAAGTATTTGTGGGTGGCTTTCTGTTTGTGGGTTTTAACATGCTTACTTCTTCCTTCTTTCTCATATGGACTTATGAGAATTGGTTTGAAGAAGAGGTCTATAGATCTTCAAAGCATTAGAGCTGGCAGGTCGGCAAGCGCAGAGCTAACATTAGGCAGACCAATGCTCGGTGCATACGATCAGTATATTGGCGAGCCACAAGATGATGGTACAGTACCTTTGAAGAATTTTTTGGATGCACAATATTATGGAGAGATTGGAATTGGCACACCCCCACAGACCTTCAATGTTATATTTGATACTGGTAGTTCCAACCTCTGGGTTCCATCGTCAAAGTGTTATTTTTCTCTTGCCTGCTACACTCATCACTGGTACAAGCCAAAGAAATCCAAAACATATACCAAAAATGGAACATCATGCAAAATAAGATATGGATCAGGAGCGATATCTGGTTTTTTCAGTCAAGATAATGTTAAAGTTGGCAATCTTATTGTGAAAAATCAAGATTTCATTGAGGCTACCCGAGAAGGAAGTCTTTCCTTTGTGCTAGCGAAATTTGATGGATTATTTGGGCTCGGGTTTCAGGAGATCTCAGTGGAAAATGCTGTGCCAGTATGGTACAATATAGTGCAGCAACATCTTATAAACGAGCAGGTCTTCTCTTTCTGGCTCAATGGGGATCCAAACGCCAAGAACGGCGGTGAATTAATTTTTGGAGGTGTTGATCCAAAGCACTTCAAAGGAAACCACTCCTATGTTCCAGTAACTAAAAAGGGCTACTGGCAGATTGAAATTGGTGATTTTTTCGTTGGAGGTCTCTCAACAGGTGTTTGTGGTGGTGGATGTGCTGCAATTGTGGATTCAGGAACATCCTTGCTTGCTGGTCCAACTACTGTTGTAACTCAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAGGATGTTGTTTCTGAATATGGAGATTTGTTATGGGATCTCTTGGTATCAGGGGTACGACCTGGTGATGTGTGTTCACAAGTTGGTTTATGTTTTCTCGAGAATGATCAATCTAATAAGAGCGTTGGCATTGAGATGGTGACTGAAAAGGAACATAGAGAGATATCAGCTAAAAATACTCCTTTGTGCTCTTCCTGTCAGATGCTTGTGGTTTGGATCCAGAATCAGTTGAAACAAAAGTCCACCAAGGAAGTAGTATTCGACTATGTTAATCAGTTGTGTGAGAACTTGCCAAGTCCAAATGGAGAATCAGTAGTAAGCTGTGATGGCATTTCTACATTGCCAAACATTACATTTACTATTGGAGATAAACCTTATATCCTCACTCCAGAGCAGTATATTTTGAAAACCGGAGAAGGCATTACACAAGTCTGCCTTAGTGGGTTCATTGCTTTCGACATTCCTCCTCCTCGTGGTCCTATCTGGATTCTTGGTGATATCTTCATGAGGGTATATCATACCGTCTTTGATTACGGGAATCTCCGAGTTGGCTTTGCTAAAGCTGCATAA 1530 0.4111 MGNKYLWVAFCLWVLTCLLLPSFSYGLMRIGLKKRSIDLQSIRAGRSASAELTLGRPMLGAYDQYIGEPQDDGTVPLKNFLDAQYYGEIGIGTPPQTFNVIFDTGSSNLWVPSSKCYFSLACYTHHWYKPKKSKTYTKNGTSCKIRYGSGAISGFFSQDNVKVGNLIVKNQDFIEATREGSLSFVLAKFDGLFGLGFQEISVENAVPVWYNIVQQHLINEQVFSFWLNGDPNAKNGGELIFGGVDPKHFKGNHSYVPVTKKGYWQIEIGDFFVGGLSTGVCGGGCAAIVDSGTSLLAGPTTVVTQINHAIGAEGVLSVECKDVVSEYGDLLWDLLVSGVRPGDVCSQVGLCFLENDQSNKSVGIEMVTEKEHREISAKNTPLCSSCQMLVVWIQNQLKQKSTKEVVFDYVNQLCENLPSPNGESVVSCDGISTLPNITFTIGDKPYILTPEQYILKTGEGITQVCLSGFIAFDIPPPRGPIWILGDIFMRVYHTVFDYGNLRVGFAKAA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0595 509 CDD phytepsin 75 507 IPR033869 GO:0004190
Lan20g0595 509 Pfam Saposin-like type B, region 1 381 418 IPR007856 GO:0006629
Lan20g0595 509 ProSiteProfiles Saposin B type domain profile. 315 355 IPR008139 -
Lan20g0595 509 Gene3D - 315 418 - -
Lan20g0595 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 287 298 IPR001969 GO:0004190|GO:0006508
Lan20g0595 509 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Lan20g0595 509 PRINTS Pepsin (A1) aspartic protease family signature 237 250 IPR001461 GO:0004190|GO:0006508
Lan20g0595 509 PRINTS Pepsin (A1) aspartic protease family signature 287 298 IPR001461 GO:0004190|GO:0006508
Lan20g0595 509 PRINTS Pepsin (A1) aspartic protease family signature 482 497 IPR001461 GO:0004190|GO:0006508
Lan20g0595 509 SUPERFAMILY Saposin 316 418 IPR011001 -
Lan20g0595 509 ProSiteProfiles Saposin B type domain profile. 379 420 IPR008139 -
Lan20g0595 509 Gene3D Acid Proteases 28 243 IPR021109 -
Lan20g0595 509 Pfam Eukaryotic aspartyl protease 84 508 IPR033121 -
Lan20g0595 509 Pfam Saposin-like type B, region 2 319 351 IPR008138 -
Lan20g0595 509 Gene3D Acid Proteases 244 509 IPR021109 -
Lan20g0595 509 ProSiteProfiles Peptidase family A1 domain profile. 85 506 IPR033121 -
Lan20g0595 509 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 4 509 IPR001461 GO:0004190|GO:0006508
Lan20g0595 509 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 4 509 - -
Lan20g0595 509 SUPERFAMILY Acid proteases 15 508 IPR021109 -
Lan20g0595 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Lan20g0595 509 SMART sapb_4 279 351 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0595 Lan-Chr20 4655394 4659857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0595 K08245 - gmx:547993 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0921 4 11241303 11246279 Lan20g0595 20 4655394 4659857 PCT
Lan20g0595 20 4655394 4659857 Lan4g0921 4 11241303 11246279 PCT