Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0630 ATGTCTTCTTTCTTTGCAAGAACTCATAGGTTCTCATTGGTTGCTCAACTACTTCTACTAGTCCTATTGACCATAAATCTTCATATAGCAGATGCTCAAATAGGCGTTTGTTATGGCATGATGGGTAATAATCTTCCACCAGCAAATGAAGTAATAAATCTATACAAATCAAACAATATCCAAAGAATGAGACTCTATGATCCTAATCAAGCTGCTCTAGAAGCACTTAGAAACTCTGGCATTGAACTCATTCTAGGTATACCCAACTCTGATCTTCAAAGCCTAGCCACCAATGCTGATAATGCACGCCAATGGGTGCAAAGAAACGTGTTGAACTTCTGGCCTAGTGTGAAAATCAAGTATATTGCAGTTGGCAATGAAGTTAGTCCAGTTAATGGTGCAACTTCTTGGATGGCTCAATATGTTCTACCTGCAGTGCAAAACATTTACCAAGCTATAAGGGCACAAAACCTACATGACCAAATCAAAGTTTCAACATCTATTGACATGACCCTAATAGGAAACTCCTACCCTCCATCACAAGGGTCATTTAGGGCAGATGTAAGGTCATACCTAGACCCAATCATAGGGTACTTGTTATATGCAAGTGCACCTTTATTAGTAAATGTGTACCCTTATTTTAGTTATTCTGGTAACCCACGTGATATATCTCTTCCTTATGCTCTTTTTACTTCCCCTAATGTTGTGGTAAGAGATGGACAATATCAGTATCAAAACCTTTTTGATGCTATGTTGGATTCAGTGCATGCAGCTATTGATAACACTGGAATTGGTTATGTTGAGGTTGTTGTGTCCGAAAGTGGTTGGCCTTCAGATGGAGGGGCTGCAACTTCTTATGATAATGCACGCATTTATTTGGATAATTTGATTCGTCATGTTAAAGGAGGTACACCAAGAAGACCATGGAAGGCTACAGAAACTTATTTGTTTGCTATGTTTGATGAGAATCAGAAGAGTCCAGAGTTGGAGAAACATTTTGGACTCTTCTCTGCCAATAAACAAAAGAAGTACCCTTTTGGATTTGGTGGAGAAAGGATCAATGAAGTTGTTGCTGCTAGTGATTTTAATGCAACAAATCCTCTAAAGAGTGATATTTAA 1119 0.3843 MSSFFARTHRFSLVAQLLLLVLLTINLHIADAQIGVCYGMMGNNLPPANEVINLYKSNNIQRMRLYDPNQAALEALRNSGIELILGIPNSDLQSLATNADNARQWVQRNVLNFWPSVKIKYIAVGNEVSPVNGATSWMAQYVLPAVQNIYQAIRAQNLHDQIKVSTSIDMTLIGNSYPPSQGSFRADVRSYLDPIIGYLLYASAPLLVNVYPYFSYSGNPRDISLPYALFTSPNVVVRDGQYQYQNLFDAMLDSVHAAIDNTGIGYVEVVVSESGWPSDGGAATSYDNARIYLDNLIRHVKGGTPRRPWKATETYLFAMFDENQKSPELEKHFGLFSANKQKKYPFGFGGERINEVVAASDFNATNPLKSDI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0630 372 SUPERFAMILY (Trans)glycosidases 34 347 IPR017853 -
Lan4g0630 372 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
Lan4g0630 372 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 355 IPR044965 GO:0004553|GO:0005975
Lan4g0630 372 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 20 355 - -
Lan4g0630 372 Pfam Glycosyl hydrolases family 17 34 346 IPR000490 GO:0004553|GO:0005975
Lan4g0630 372 Gene3D Glycosidases 33 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0630 Lan-Chr4 8676212 8678278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0630 40 352 Glycoside Hydrolase AT4G16260 63.175 1.83e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0630 - - ccaj:109791097 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0630 4 8676212 8678278 Lan19g0828 19 14749620 14751465 LSH