Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0828 ATGGCTTCATTCTTTGCAACCAACAAGAGTACCTTAATGGCTTCTCTAATGCTCTTATTGGCATTATTTACTATAAATATTCATATTGCCGGAGCTCAAATAGGTATTTGTTATGGCATGATGGGCAACAATCTACCATCACACAACCAAGTTATTGATCTCTATAAATCAAACAACATCAAGAGCATGAGACTTTATGAACCAAACCAAGAAGCTCTAGAAGCACTTAGGAACTCTGGTCTAGAACTCATGTTAGGTGTGCCAAATTCTGACCTTCAAAAACTTTCTAACAATGCTAATGCTATTCAATGGGTACAAAACAATGTGTTGAATTTTTGGCCTAGTGTCAGCATCAAATACATTGCAGTTGGTAATGAAGTGAGTCCAGTTGGAGGTACATCAAGCTTAGCACAATTTGTTCTCCCAGCAATCCAAAATATATACCAAGCTATAAGAGCCAAGGGTCTTCATGACCAAATAAAAGTTTCAACAGCAATTGACATGACCCTAATAGGGACATCCTACCCTCCATCTAAGGGTTCATTTAGAAGTGATGTAAGGTCATATTTGGATCCAATCATAGGGTATTTAGTATATGCAAATGCACCTTTATTTGCAAATGTATACCCTTATTTTAGTTATTCTGGTAACCCTAGTGATATATCTCTTCCTTATGCATTGTTCACTTCTCCTAATGTTGTTGTTTGGGATGGTTCAAGGGGATACCAAAACCTCTTTGATGCCTTGTTGGATTCATTGCATGCTGCAATAGATAGCACTAACATTGGATATGTTAAGGTTGTTGTGTCTGAAAGTGGTTGGCCATCAGAGGGTGGGTTTGGAACAACATATGATAATGCACGTGTTTACTTAGGTAATTTGATTCAACATGTGAAACAAGGTACTCCAATGAGGCCTGGACTTATAGAGACTTATTTGTTTGCTATGTTTGATGAGAATCAAAAGGGTAATGAGATAGAGAAGCACTTTGGGGTCTTTTATCCTAACAAACAGAAGAAGTATCCATTTGGTTTTGGTGGAGAAAGGAACTTGGACATTGGTTCTAGTGTGTTCAATGTATCTGTTCCTCTTAAGAGTGACATGTAA 1107 0.3749 MASFFATNKSTLMASLMLLLALFTINIHIAGAQIGICYGMMGNNLPSHNQVIDLYKSNNIKSMRLYEPNQEALEALRNSGLELMLGVPNSDLQKLSNNANAIQWVQNNVLNFWPSVSIKYIAVGNEVSPVGGTSSLAQFVLPAIQNIYQAIRAKGLHDQIKVSTAIDMTLIGTSYPPSKGSFRSDVRSYLDPIIGYLVYANAPLFANVYPYFSYSGNPSDISLPYALFTSPNVVVWDGSRGYQNLFDALLDSLHAAIDSTNIGYVKVVVSESGWPSEGGFGTTYDNARVYLGNLIQHVKQGTPMRPGLIETYLFAMFDENQKGNEIEKHFGVFYPNKQKKYPFGFGGERNLDIGSSVFNVSVPLKSDM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0828 368 SUPERFAMILY (Trans)glycosidases 34 344 IPR017853 -
Lan19g0828 368 Pfam Glycosyl hydrolases family 17 34 343 IPR000490 GO:0004553|GO:0005975
Lan19g0828 368 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Lan19g0828 368 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 352 IPR044965 GO:0004553|GO:0005975
Lan19g0828 368 Gene3D Glycosidases 33 346 - -
Lan19g0828 368 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 21 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0828 Lan-Chr19 14749620 14751465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0828 40 350 Glycoside Hydrolase AT4G16260 61.783 3.62e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0828 - - ccaj:109791097 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0630 4 8676212 8678278 Lan19g0828 19 14749620 14751465 LSH