Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0615 ATGGTGGTGGCTTCTCCAACTTCTATCCAAAACGAAAAGATTCAACCCTTTGAACTTCCCATAATAGACCTAGCAGAAGAAAGATCCATTGTGATGAAAAACATAGTGAAAGCAAGTGAAGAGTTTGGTTTCTTCAATGTAATAAACCATGGTGTGTCTAATGATACTATAACCAAAATGGAAGAAGCAGGTTTTGATTTCTTTGCTAAACCGGTGGAGCAAAAGAAACTAGCTATGCCCATTGGTGATTCATTTGGTTATGGAAGCAAGAACATTGGTATCAATGGAGACATGGGTGAAATAGAGTACCTACTTTTCAATGCTAGTACTCAACTCTTTAGAACCATTTCCAATGACCCATCAAACTTGAGGTCTAGGGCAAGTGAATACACAGATGCAGTGATGAACCTTGCATGTGAGATATTGGAGCTAATGGCAGAGGGTATGGGGGTCCCTGATACATTGTGTTTCAGCAGGTTCATCAGGGAAGTTGAAAGTGACTCAATTCTGAGACTCAATCACTACCCACATGATCATAATAATAACATACTTAACATAAACAAAGATTGCGACATTGGTACACACAATTCCCCTTCTTACAACTACACCAAGGTTGGTTTTGGAGAGCATTCTGACCCTCAGATCTTGACTATACTTAGATCTAACGATGTGGATGGCCTCCAAATTTCTCTTCAAGATGGTCAGTGGAGCCCAGTTACTCCTGACCCTTCAGCTTTCTGTGTTAATGTGGGTGACCTACTAGAGGTTATGACAAATGGAAGATTTGTAAGTGTGAGACATAGGGTCGTGACCAACTCATACAACAACAAGTCAAGAATGTCCATAGCATATTTTGGGGCTCCACCATTAAATGCATGCATTGTTGCTCCACCACTTATGGTTACACCAGAGAGGCCCTCCCTATTCCGACCATTTACTTGGGCTGAGTACAAGAAAGCCACCTACTCTCTCAGGCTTGGAGACACTCGCATTCACCTCTTCAGGAACTGA 1011 0.4174 MVVASPTSIQNEKIQPFELPIIDLAEERSIVMKNIVKASEEFGFFNVINHGVSNDTITKMEEAGFDFFAKPVEQKKLAMPIGDSFGYGSKNIGINGDMGEIEYLLFNASTQLFRTISNDPSNLRSRASEYTDAVMNLACEILELMAEGMGVPDTLCFSRFIREVESDSILRLNHYPHDHNNNILNINKDCDIGTHNSPSYNYTKVGFGEHSDPQILTILRSNDVDGLQISLQDGQWSPVTPDPSAFCVNVGDLLEVMTNGRFVSVRHRVVTNSYNNKSRMSIAYFGAPPLNACIVAPPLMVTPERPSLFRPFTWAEYKKATYSLRLGDTRIHLFRN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0615 336 PRINTS Isopenicillin N synthase signature 35 52 - -
Lan4g0615 336 PRINTS Isopenicillin N synthase signature 210 231 - -
Lan4g0615 336 PRINTS Isopenicillin N synthase signature 246 272 - -
Lan4g0615 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 335 - -
Lan4g0615 336 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 335 - -
Lan4g0615 336 Gene3D - 3 325 IPR027443 -
Lan4g0615 336 SUPERFAMILY Clavaminate synthase-like 11 328 - -
Lan4g0615 336 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 288 IPR005123 -
Lan4g0615 336 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 89 IPR026992 -
Lan4g0615 336 Pfam 2OG-Fe(II) oxygenase superfamily 167 286 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0615 Lan-Chr4 8564844 8571237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0615 10 335 Glycosyltransferase AT5G59530 27.666 2.53e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0615 K04125 - gmx:100816206 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0911 12 16071101 16075950 Lan4g0615 4 8564844 8571237 PCT
Lan4g0615 4 8564844 8571237 Lan12g0911 12 16071101 16075950 PCT