Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0911 ATGGTGTTGGCTTCTCCAAACCCGATTCATAGCGAAAGGATTTTAGCCACGGACCTTCCCATAGTGGACCTTAAGGCAGAAAAGTCACAAGTGATAAAGCTCATTGTGAAAGCATGTGAAGAATATGGTTTTTTCAAGGTGATAAACCATGGTATCACTAATGAAACTATAGCTAAAATGGAAGAATCAGCGTTTGGTTTCTTTGCAAAACCAGTGACACAAAAGAGACAAGCTTCGCCTTGTTATGGTTGCAAGAACATAGGCTTCAATGGAGACATGGGTGAGGTTGAGTATCTTATGCTCAATGCTACTACTCCATCTATTGCTCACTTATCCAATACCATATCCACCGACTTTAGCTCTAGGGTAAGTGCATACACAGAGGCAGTGAAGGAGTTAGCATGTGAGATATTGGAGCTAATGGCAGAGGGCCTAGGGGTCCCTGATAAATCAGTATTCAGCAGGTTGATCAACCATGTTGATAGTGACTCAGTCCTTAGGCTCAATCACTATCCACCTATACACTACCCCAACAAAGATAGGGACAAGACCACTTGTTACAACTATACAAAGGTTGGTTTTGGGGAGCATTCTGACCCTCAGATCTTGACTATACTAAGATCCAATGACGTGGGTGGCCTTCAAATTTCCCCTGAAGATGGATTGTGGATCCCAGTAACACCAGACCCCTCAGCATTCTGTGTTAATGTGGGTGATGTATTAGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCTATGACAAACTCATACAAGTCTAGAATGTCAATGGTATATTTTGGGGCTCCACCACTGCATGCCAGCATTATTGCTCCACCAGTTATGGTTACACCACAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCTGATTATAAGAAAGCCACTTACTCTCTCAGGCTTGGAGACAACCGTATTGACCTTTTCAGAACAATCCCTCATGGGCTCTGA 981 0.4363 MVLASPNPIHSERILATDLPIVDLKAEKSQVIKLIVKACEEYGFFKVINHGITNETIAKMEESAFGFFAKPVTQKRQASPCYGCKNIGFNGDMGEVEYLMLNATTPSIAHLSNTISTDFSSRVSAYTEAVKELACEILELMAEGLGVPDKSVFSRLINHVDSDSVLRLNHYPPIHYPNKDRDKTTCYNYTKVGFGEHSDPQILTILRSNDVGGLQISPEDGLWIPVTPDPSAFCVNVGDVLEVMTNGRFVSVRHRAMTNSYKSRMSMVYFGAPPLHASIIAPPVMVTPQRPSLFRPFTWADYKKATYSLRLGDNRIDLFRTIPHGL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0911 326 SUPERFAMILY Clavaminate synthase-like 15 314 - -
Lan12g0911 326 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 321 - -
Lan12g0911 326 Pfam 2OG-Fe(II) oxygenase superfamily 163 271 IPR044861 -
Lan12g0911 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 321 - -
Lan12g0911 326 Coils Coil 123 143 - -
Lan12g0911 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
Lan12g0911 326 Gene3D - 4 310 IPR027443 -
Lan12g0911 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 273 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0911 Lan-Chr12 16071101 16075950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0911 18 320 Glycosyltransferase AT5G59530 25.378 4.95e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0911 K04125 - gmx:100783917 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0911 12 16071101 16075950 Lan12g0911 12 16071101 16075950 ECH
Lan12g0911 12 16071101 16075950 Lan4g0615 4 8564844 8571237 PCT
Lan4g0615 4 8564844 8571237 Lan12g0911 12 16071101 16075950 PCT