Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0216 ATGGGGTTCGGTTTGTTAGCTTCCAAAGCCATGAGACCAACCTCAAGGCTTCTCAATTCCGCAAACCCTAGCAACCTTTTTCTCCGAACCATAGTCTCCAAACCTGAGCTCAACAAACCCGAACCTTCCGCCGCAACGGAGCCACCGCCGCCAGATCTACCACCCCGCACTCCTGTCGCCGGCGCTAGGGTCCATTTCACCAACCCCGATGATGCCATCGAGGTTTTCGTCGATGGTTTTCCCGTTAAGATCCCTAAGGGATTTACTGTTCTTCAGGCTTGTGAGGTCGCCGGCGTCGATATTCCTCGATTTTGTTACCATAGTCGATTATCTATTGCCGGTAACTGCCGTATGTGCCTCGTTGAGGTTGAGAAATCGCCCAAACCTGTTGCTTCTTGCGCTATGCCCGCCCTTCCTGGGATGAAAATTAAGACCGACACACCTGTGGCAAAGAAAGCGCGAGAAGGGGTGATGGAATTTTTATTGATGAATCATCCATTGGATTGCCCAATTTGTGATCAGGGTGGGGAATGTGACCTTCAGGATCAGTCAATGGCATTTGGTGCTGATCGTGGTCGATTCATAGAAACAAAGAGATCTGTGGTGGATAAAAATCTTGGACCATTGGTCAAGACCGTGATGACTCGATGCATTCAATGTACAAGGTGTGTTAGATTTGCATCAGAGGTTGCAGGGGTTCAAGATCTTGGCATTTTAGGTCGTGGCAGTGGAGAGGAGATTGGAACATATGTTGAAAAACTTATGACAAGTGAACTTTCTGGAAATGTGATAGATATCTGTCCTGTAGGAGCACTCACTTCAAAACCTTTTGCATTTAAAGCCCGTAACTGGGAGTTGAAGGGTACAGAAACCATTGATGTTACTGATGCTGTTGGATCCAATATTCGGATTGATAGCAGAGGACCAGAAGTCATGCGTATTCTTCCTCGTTTAAATGAGGACATAAATGAAGAATGGATTTCAGACAAGACCCGCTTTTGTTATGATGGTTTGAAAAGGCAGAGATTAAATGACCCTATGATTCGTGATCCCGATGGACGTTTCAAGGCTGTGAGCTGGCGTGATGCCCTTGCTGTGGTAGCAGAGATTGCCCATGGAGTTAAACCAGATGAAATTGTTGGAATATCTGGCAAACTTTCTGATGCTGAGTCCATGATTGCACTAAAAGATTTCATAAATAGGTTGGGCTCAAACAATGTGTGGGGTGAAGGCATTGGCGCAAATACTAACGCTGATTTGAGATCAGGATATATTATGAATACTAGTATTGCTGGTCTTGAGAAAGCAGATGTTTTCCTGTTGGTTGGTACCCAGCCACGGGTGGAAGCTGCTATGGTTAATGCCAGAATACGGAAGACTGTCAGAGCATCCCATGCCAAGGTTGGGTACATTGGACCTGATGCTGATTTCAACTATGATCATGAACATCTCGGTACTGGCCCAGAAACACTTCTTGAAATAGCCGAGGGTCGCCACCCATTTTCCAAGTTAATCTCAGATGCCAAAAATCCTGTTATCATTGTGGGTGGTGGGATTTTTGAGAGGAAGGACCAGGATGCAATTTTTGCTGCTGTTGAAACTATTGCAAAACAAGGGAAGGTTGTCAGATCTGACTGGAATGGCCTTAATGTATTGCTTCTCCATGCTGCCCAAGCTGCTGCACTTGACCTTGGACTTGTGCCCCAATCTGAAAAAAGCCTCGAGTCTGCAAAATTTGTTTATTTGGTAGGTGCTGATGATATAGACTTGGACAAGATCCCTGCTGATGCTTTTGTGGTTTATCAAGGTCACCATGGTGACAAGAGTGTTTATCGTGCTAACGTCATTTTGCCAGCAGCAGCATTCAGTGAGAAGGAAGGGACTTATGAAAATACTGAAGGATGCACTCAGCAAACATTGCCTGCAGTTCCAACAGTTGGTGACTCCAGAGATGATTGGAAGATAATCCGGGCTCTATCTGAGGTAGCTGGAGTGCGTCTACCGTATGATACAGTTGGTGCTGTTCATGCCCGAATCAAGACCGTAGCCCCAAACCTTGTACATGTGGATGAAAGAGAACCAGCCACATTGCCTTCGTCACTGAGACCAACCTTCACTAAGAATATTGATCCAACTGCTTTCGGGATTGCAGTCGAGAATTTCTATATGACTGATGCCATAACAAGGGCTTCAAAGATAATGGCACAATGCAGTGCTACACTGTTGAAGAAGTGA 2235 0.4568 MGFGLLASKAMRPTSRLLNSANPSNLFLRTIVSKPELNKPEPSAATEPPPPDLPPRTPVAGARVHFTNPDDAIEVFVDGFPVKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGADRGRFIETKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGILGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRDPDGRFKAVSWRDALAVVAEIAHGVKPDEIVGISGKLSDAESMIALKDFINRLGSNNVWGEGIGANTNADLRSGYIMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIRKTVRASHAKVGYIGPDADFNYDHEHLGTGPETLLEIAEGRHPFSKLISDAKNPVIIVGGGIFERKDQDAIFAAVETIAKQGKVVRSDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLVGADDIDLDKIPADAFVVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTVGAVHARIKTVAPNLVHVDEREPATLPSSLRPTFTKNIDPTAFGIAVENFYMTDAITRASKIMAQCSATLLKK* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0216 744 MobiDBLite consensus disorder prediction 42 57 - -
Lan4g0216 744 SMART NADH_G_4Fe_4S_3_2 154 194 IPR019574 GO:0016491
Lan4g0216 744 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 216 226 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan4g0216 744 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 284 690 - -
Lan4g0216 744 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL 50 698 - -
Lan4g0216 744 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 169 181 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan4g0216 744 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 102 119 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan4g0216 744 Gene3D - 342 419 - -
Lan4g0216 744 Pfam Molybdopterin oxidoreductase 342 661 IPR006656 GO:0016491
Lan4g0216 744 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 50 698 - -
Lan4g0216 744 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 71 149 IPR001041 GO:0051536
Lan4g0216 744 Gene3D - 590 693 - -
Lan4g0216 744 SUPERFAMILY 2Fe-2S ferredoxin-like 73 145 IPR036010 GO:0051536
Lan4g0216 744 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 154 191 IPR019574 GO:0016491
Lan4g0216 744 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 286 342 IPR006963 GO:0016491
Lan4g0216 744 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 708 737 IPR015405 GO:0016651|GO:0051536
Lan4g0216 744 Gene3D - 72 194 - -
Lan4g0216 744 MobiDBLite consensus disorder prediction 37 59 - -
Lan4g0216 744 CDD fer2 73 144 IPR001041 GO:0051536
Lan4g0216 744 TIGRFAM NuoG: NADH dehydrogenase (quinone), G subunit 75 659 IPR010228 GO:0016651|GO:0051536
Lan4g0216 744 CDD MopB_Res-Cmplx1_Nad11 290 663 - -
Lan4g0216 744 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 149 188 IPR019574 GO:0016491
Lan4g0216 744 Gene3D Dimethylsulfoxide Reductase, domain 2 420 472 - -
Lan4g0216 744 SUPERFAMILY 4Fe-4S ferredoxins 146 282 - -
Lan4g0216 744 Pfam 2Fe-2S iron-sulfur cluster binding domain 71 148 - -
Lan4g0216 744 Gene3D - 198 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0216 Lan-Chr4 3545888 3550888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0216 K03934 - gmx:100802040 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0216 4 3545888 3550888 Lan16g0606 16 7428488 7434861 LSH