Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0606 ATGGGGTTAGGTTCGTTAGCTTCCAGAGCCATGAGACCAACCTCAAGGTTTCTTCTCAATTCCTCAAACCCTAACAACATTTTTCTACGAACCATAGTGTCTAAATCTGAGCTCAACAAACCCGAACCTTCCGCCGCACCGGAACCACCGCAGGCCGATCTGCCACCCCGCACTCCTGTCGCCGGCGCTAGGGTTCACTTTACCAACCCTGACGATGCTATCGAGGTTTTCGTTGACGGTTTTCCAGTTAAGATCCCTAAGGGATTTACCGTTCTTCAGGCTTGTGAGGTCGCCGGCGTTGATATTCCTCGCTTCTGCTACCATAGCCGGTTGTCTATCGCCGGGAATTGCCGAATGTGCCTCGTCGAGGTTGAGAAATCGCCTAAGCCTGTTGCTTCTTGTGCCATGCCCGCGCTTCCTGGGATGAAAATTAAGACTGACACACCTGTGGCAAAGAAAGCTCGAGAAGGAGTGATGGAATTTTTATTGATGAATCATCCATTGGATTGCCCAATTTGTGATCAGGGTGGGGAGTGTGATCTTCAGGATCAGTCAATGGCATTTGGCGCTGATCGTGGTCGGTTCACGGATACGAAGAGATCTGTGGTGGATAAAAATCTTGGACCTTTGGTCAAGACTGTGATGACTCGGTGCATTCAATGTACAAGGTGTGTTAGATTTGCAACGGAGGTTGCAGGAGTTCAGGATCTTGGCATATTAGGCCGTGGCAGTGGAGAGGAAATTGGAACATATGTTGAAAACCTTATGACAAGTGAACTTTCTGGAAATGTGATAGATATCTGTCCTGTAGGAGCACTCACTTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGGGTACAGAGAGCATTGATGTTACTGATGCTGTTGGATCTAATATTCGAATTGACAGCAGAGGACCTGAAGTTATGCGTATTCTTCCTCGTTTGAATGAGGACATAAATGAAGAATGGATTTCAGACAAGACCCGCTTTTCTTATGATGGTTTGAAAAGGCAGAGATTAAATGACCCTATGATTCGTGATCCTGATGGACGTTTCAAAGCTGTAAGCTGGCGTGATGCCCTTGCTGTGGTAGCAGAGGTTGCCCATGGAGTTAAACCAGAAGAAATTGTCGGAATATCTGGCAAACTTTCTGATGCTGAGTCTATGATAGCACTAAAAGATTTCATAAATAGGATTGGGTCAAACAATGTGTGGTGTGAAGGCATTGGCGTGAATACTAATGCTGATTTGAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAGAAAGCAGATGTTTTCCTATTCTCAAATTTGCAGCCACGGGTGGAAGCTGCTATGGTTAATGCCAGAATTCGGAAGACTGTCAGAGCATCCCAAGCCAAGGTTGCGTACATTGGACCTGCTACTGATTTCAACTATGATCATGAACATCTCGGTACTGGCCCTCAAACACTTCTTGAAATAGCTGAGGGTCACCACCCATTTTCCAAGACAATCTCAAATGCCAAAAACCCTGTTATAATTGTTGGTGGTGGGATTTTTGAGAGGAAGGACCAGGATGCAATTTTTGCAGCTGTTGAAACTATTGCAAAACAAGGGAATGTTGTCAGACCTGACTGGAATGGCCTTAATGTATTGCTTCTCCATGCTGCCCAGGCTGCTGCACTTGACCTTGGACTTGTGCCCCAATCTGAAAAAAGCCTCGAATCTGCAAAATTTGTTTATTTAATGGGCGCTGATGATGTAGACTTGGACAAGATCCCATCTGATGCTTTTGTTGTTTATCAAGGCCACCATGGTGACAAGAGTGTTTATCGTGCTAATGTCATTTTGCCAGCATCAGCCTTCAGCGAGAAGGAAGGGACCTATGAAAATACTGAAGGATGCACTCAACAAACATTGCCTGCAGTCCCAACAGTTGGTGATTCTAGAGATGACTGGAAGATAATCCGAGCTCTGTCTGAAGTAGCTGGAGTGCGTTTGCCCTATGATACAGTTGGCGCTGTTCATGCCCGAATCAAGACCGTAGCCCCAAACCTTGTGCACGTAGATGAAAGAGAGCCAGCTACATTGCCGTCTTCGCTGAGACCAGCCTTCACTAAGAATGTTGATTCAACTGCCTTCGGGACAGCAGTTGAAAATTTCTATATGACCGATGCCATTACAAGGGCTTCAAAGATCATGGCACAATGCAGTGCTACGCTGTTGAAGAAGTGA 2238 0.4562 MGLGSLASRAMRPTSRFLLNSSNPNNIFLRTIVSKSELNKPEPSAAPEPPQADLPPRTPVAGARVHFTNPDDAIEVFVDGFPVKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGADRGRFTDTKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGILGRGSGEEIGTYVENLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFSYDGLKRQRLNDPMIRDPDGRFKAVSWRDALAVVAEVAHGVKPEEIVGISGKLSDAESMIALKDFINRIGSNNVWCEGIGVNTNADLRSGYIMNTSIAGLEKADVFLFSNLQPRVEAAMVNARIRKTVRASQAKVAYIGPATDFNYDHEHLGTGPQTLLEIAEGHHPFSKTISNAKNPVIIVGGGIFERKDQDAIFAAVETIAKQGNVVRPDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDVDLDKIPSDAFVVYQGHHGDKSVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTVGAVHARIKTVAPNLVHVDEREPATLPSSLRPAFTKNVDSTAFGTAVENFYMTDAITRASKIMAQCSATLLKK* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0606 745 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 51 699 - -
Lan16g0606 745 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 285 691 - -
Lan16g0606 745 MobiDBLite consensus disorder prediction 39 62 - -
Lan16g0606 745 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 170 182 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan16g0606 745 SMART NADH_G_4Fe_4S_3_2 155 195 IPR019574 GO:0016491
Lan16g0606 745 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 708 738 IPR015405 GO:0016651|GO:0051536
Lan16g0606 745 Pfam 2Fe-2S iron-sulfur cluster binding domain 72 149 - -
Lan16g0606 745 Pfam Molybdopterin oxidoreductase 343 662 IPR006656 GO:0016491
Lan16g0606 745 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 217 227 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan16g0606 745 TIGRFAM NuoG: NADH dehydrogenase (quinone), G subunit 76 660 IPR010228 GO:0016651|GO:0051536
Lan16g0606 745 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 287 343 IPR006963 GO:0016491
Lan16g0606 745 Gene3D - 198 276 - -
Lan16g0606 745 Gene3D - 73 195 - -
Lan16g0606 745 Gene3D - 588 694 - -
Lan16g0606 745 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL 51 699 - -
Lan16g0606 745 Gene3D - 279 392 - -
Lan16g0606 745 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 72 150 IPR001041 GO:0051536
Lan16g0606 745 SUPERFAMILY 4Fe-4S ferredoxins 147 283 - -
Lan16g0606 745 CDD fer2 74 145 IPR001041 GO:0051536
Lan16g0606 745 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 103 120 IPR000283 GO:0008137|GO:0016020|GO:0042773
Lan16g0606 745 CDD MopB_Res-Cmplx1_Nad11 291 664 - -
Lan16g0606 745 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 155 192 IPR019574 GO:0016491
Lan16g0606 745 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 150 189 IPR019574 GO:0016491
Lan16g0606 745 SUPERFAMILY 2Fe-2S ferredoxin-like 74 146 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0606 Lan-Chr16 7428488 7434861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0606 K03934 - gmx:100802040 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0216 4 3545888 3550888 Lan16g0606 16 7428488 7434861 LSH