Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0187 ATGGTGTTGAAGAAGAGGCTAGGTTATGGATTCAATGGCTTTCAAGTCCCCTTTATACCTCGCCGTCCAAGATCTGCAAGAAGGAAGTGTCCTTCCAAGAAAGATGATCAAGTTTGTGCCTTTGAACTTCTGGCCTCTTTAGCTGGCAAGTTGTTGGAGGAGGGTGAAAGTTCCGCTTCTAGCAATGCATCTGAATGTAATCATCAGCCTTCCCTTAGCCAAGACGTCAACGAGCTAGATAGGCAAGAAGAAGTTAAACCATTAATAGCCGAGGACATTCATCATGTAAGTTGTGCAGAGAGTATTTCTGTGACTGATGTAGCCTCACAAAATAGTAGTCAGAAACCTCTTCTGCATGCCAAGACTGAATGTGTACTAGGACACAATTCCAGTGTGAAGTCTGAAATTTTCAAATTGGAGAAAAAAATTGAACACCGTCCTAATAGTTATTCTAATAAATTAGTAGAATCACCTGGAGATTTTAGGGGGTCTTGTGATGGTAATGTAAAGAATGGATTTAGACGGGAACTGGAGGCTGATAAATGTAGTTTGAAGGACCAATTGGAGTTACATGACTCTCCTGCGCTAGTTGACTCAAGCAGCGATGTTAAACCACAATATCATAGGGAGTCTTTTCCCAATGCTTCATTTTCCAAGCATGGGAATGATGTTAAGTTAGGTTTTAGAGATGATGGCGAAAACTTTTTAAGGTGCAATGATGTTTGCAACAAGTCAAAGGCTTTTAGGATTCCACAACACATTGCACACCGGAAAATCAGGAAACAGCTGTTTTCCAAATACTGGAAGGCTGGTCCAAAGTTGAAGGATTGTGAACTTTATAAATCTGAATTTGCAGATGTAGAAGTAAAACCTCTTTATCATAAGCGGAAGGCTAGTTATGGTTTCATAACATCTCAGCACAACACTGTTGTTAAGAAGAGGAAATTCTTTGACCGAGTTTCGGGGGTAACTTCTGATGGAGTATTCAGTAGTGAGAGTGTGTCTAATTCACCCGAGAAAGGAATTGATGGAGACAACCCAGACTTATCTGCAAAGATGCACGCTCCTAAGGATTCTCATGTGAAGTTTAGCATTAAGTCATTAAGGATACCAGAAGTATATATTGAGGTTCCTGACACTGCAACTGTTGGTTTTCTAAAGAGGAGAATCATGGAGGAGGTGATGGCTATACTTGAAGATAATGTTCATGTTGGTGTTCTTCTTCAAGAGGAAAAAGTTAAAGATGACAATATAACACTTATGCAGACTGGTATATCTTGCAAAGAAAATCTGGATACTCTAACTTTCGTGTTGGAGCCGAGTTCTCTACTAACTTCTCCAACTGCTTGTGTTGATGATCCTTCTTTTCAATTGGAAACATCCCAGCCTGCTAGGTCCCCAATAACCCCAATCTTAGAGTCAGGGAATACTGATATTTTGGGCGACTCCTCCTTGCTGACAAATCCAGGCAATGTAATTGAAAGTAAACACGAGTCTACTACTTCCCCGGATGACACTATAGGTGACGAAATAACACCAGATTCCAAAGCGCTGGTTATTGTTCCTACTATCCCTGAAGCATTAGCTGTGGTTCCCGTGAGTCAGAAAACAAACCGTGCTGAGCTTGCCCAGCGTCGAACCAGGAGACCATTCTCTGTGACCGAGGTAGAAGCACTTGTACACATGGTTGAGGAACTTGGAACAGGAAGGTGGCGAGATGTTAAGTTGCGAGCTTTTCAGAATGCAGACCATAGGACTTATGTAGATTTGAAGGATAAATGGAAAACATTAGTGCACACAGCAAGAATCTCCCCTCAACAGAGGAGAGGAGAGCAAGTACCTCAGGAGCTTTTGGACAGAGTTTTGGCTGCACATGGTTATTGGTCTCAGCACCAAGCCAAACAGAATGTCAAACATCAAGCTATGCCTGCAATATTGAATGTGTCTAATCACTTGTGA 1959 0.417 MVLKKRLGYGFNGFQVPFIPRRPRSARRKCPSKKDDQVCAFELLASLAGKLLEEGESSASSNASECNHQPSLSQDVNELDRQEEVKPLIAEDIHHVSCAESISVTDVASQNSSQKPLLHAKTECVLGHNSSVKSEIFKLEKKIEHRPNSYSNKLVESPGDFRGSCDGNVKNGFRRELEADKCSLKDQLELHDSPALVDSSSDVKPQYHRESFPNASFSKHGNDVKLGFRDDGENFLRCNDVCNKSKAFRIPQHIAHRKIRKQLFSKYWKAGPKLKDCELYKSEFADVEVKPLYHKRKASYGFITSQHNTVVKKRKFFDRVSGVTSDGVFSSESVSNSPEKGIDGDNPDLSAKMHAPKDSHVKFSIKSLRIPEVYIEVPDTATVGFLKRRIMEEVMAILEDNVHVGVLLQEEKVKDDNITLMQTGISCKENLDTLTFVLEPSSLLTSPTACVDDPSFQLETSQPARSPITPILESGNTDILGDSSLLTNPGNVIESKHESTTSPDDTIGDEITPDSKALVIVPTIPEALAVVPVSQKTNRAELAQRRTRRPFSVTEVEALVHMVEELGTGRWRDVKLRAFQNADHRTYVDLKDKWKTLVHTARISPQQRRGEQVPQELLDRVLAAHGYWSQHQAKQNVKHQAMPAILNVSNHL* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0187 652 MobiDBLite consensus disorder prediction 58 79 - -
Lan4g0187 652 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 648 - -
Lan4g0187 652 MobiDBLite consensus disorder prediction 328 348 - -
Lan4g0187 652 ProSiteProfiles Myb-like domain profile. 543 598 IPR001005 -
Lan4g0187 652 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 648 IPR031105 -
Lan4g0187 652 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 543 602 IPR017930 -
Lan4g0187 652 SUPERFAMILY Homeodomain-like 549 630 IPR009057 -
Lan4g0187 652 SMART sant 547 600 IPR001005 -
Lan4g0187 652 Gene3D - 536 640 - -
Lan4g0187 652 MobiDBLite consensus disorder prediction 58 76 - -
Lan4g0187 652 CDD SANT_TRF 549 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0187 Lan-Chr4 3108821 3114208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0187 - - gmx:100814318 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0187 4 3108821 3114208 Lan16g0643 16 8297038 8302104 LSH