Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0643 ATGGTGTTGAAGAAGAGGTTAGGTCATGGATTCAATGGCTTTCAAGCCCCCTTTATACCTCGACGTCCTAGATCTGCAAGACGGAGTTGCTATTCCAAGAAATTGGTTGTGGATGGTCAAGCTAGTGCCTTCGAACTACTGGCAACTTTAGCTGGCAAGTTACTGGAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGGAAACCATCTTGTTAATCAGCGAGATAAACAAGATGCGGTTAGACCACTAATAGCTGAAGGAAATCATCAGGGAAGTTGTGCGGAGAGTATTTTTATGACTGATGTAGCCTCACAAAACAGTAGTCAGAAATCTCTTCCGCATGCCAAGACTGATTCTGTACTAGGACGCAATTCTGATGTGAAGGCTGAAGCTTTTGAATGGGAGAACAAAATTGGACGTTGTTCTAATAGTTACTATAATAAATTAGTAGAAGCAGCTGGAGATTTTCCGGGGTCGTATGATGGCAATGTAAAGAATGGATTTATACAGGAACGGGAGGCTGGCAGTTCTGGCTTTCAGAGATCAACTTTGGCAGATAAATTTAGTTTGAAGGACCAATTGGAGTTGCGTGGCTCTCCCGCACTAATTGACTCAAACAGTAATGTTAAATCTCCATATTGTAGCGAATCTTTTCCAAGTGCTTCATTTTCCAAGCATGGGAATGATCTGAAGTTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAATGAAGTCTGTACCAAGTCAAAGGCTTTTAGGTCTCCGCAACACATTGCACACCCAAAAATCAGGAAACCGCTGCTTTCCAAATACTGGAAGTCTAGTCCAAAGTTGAAGGAGTGCGAACTTTCTAAATCTGAATTTGCAGATGTAGACGTAAAGCCTCTTAATCATAAGAGAACTGCTAGTCACGGTTTCGAAACATCTCAGCACAACACTCTTGTTAAAAGGAGGAAGTTCTTTGACCGAGTTTCACAGGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCTAATTCACCTGAGAAAGGAATTAACGGACACAACCCGAGCTCATCTACAAAACTGCATGTACCTAAGGATTCTCATGTGAAATTTAGCATTAAGTCATTAAGGATACCAGATCTTTATATCGAGGTTCCGGAAACTGCAACCGTTGGTATGCTGAAGAGAAAAATCATGGAGGAGGTGATGGCTATACTTGAAGATAGTGTGCATGTTGGTGTTCTTCTTCAGGGACAAAAAGTTGATGATGATAACAGAACACTTGTGCAGACTGGTATATCTTGCAAAGAAAATTTGGATACTCTCAGTTTCATGTTGGAGCCGAGTTCTCTACTAGCTCCTGCTGCTGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAACCTACCAGGTCCTCAGAAATTCCAGTCTTAGAGTCAGGGAATACTGATACTTTGCATGACCCCTTCTTGCTGACAAATCCGGGCAACCTAATTGAAAGTAACCATGATTCTACTACTTCCCCCACTGACACTATAATCGAAAAAATAACACCAGATTCCAAAGCGCTAGTTGCTATACCTATTAGCCCTGAAGCATTAGCCGTTGTTCCCGTGAATCAGAAAACCAAGCGTGCTGAGATTGCACAGCGTCGGACCCGGAGACCATTCTCTGTCACCGAGGTAGAAGCACTTGTTCACGCGGTTGAGGAACTTGGAACTGGAAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGATTTGAAGGATAAATGGAAAACATTGGTGCACACTGCAAGAATCTCTCCTCAACAAAGGAGAGGAGAGCAAGTACCTCAAGAGCTCTTAGACAGAGTTTTGGCTGCACATGGTTATTGGTCTCAGCACCAAGCCAAGCAGAATGGAAAGCACCAAGCTATAGCTGGAAGTGTTGAGTGTGTCCAATCACTTGTGATGGTGTAA 1992 0.4282 MVLKKRLGHGFNGFQAPFIPRRPRSARRSCYSKKLVVDGQASAFELLATLAGKLLEESESSASSNASEGNHLVNQRDKQDAVRPLIAEGNHQGSCAESIFMTDVASQNSSQKSLPHAKTDSVLGRNSDVKAEAFEWENKIGRCSNSYYNKLVEAAGDFPGSYDGNVKNGFIQEREAGSSGFQRSTLADKFSLKDQLELRGSPALIDSNSNVKSPYCSESFPSASFSKHGNDLKLGFRDDDENFLRCNEVCTKSKAFRSPQHIAHPKIRKPLLSKYWKSSPKLKECELSKSEFADVDVKPLNHKRTASHGFETSQHNTLVKRRKFFDRVSQVTSDGGFSSESVSNSPEKGINGHNPSSSTKLHVPKDSHVKFSIKSLRIPDLYIEVPETATVGMLKRKIMEEVMAILEDSVHVGVLLQGQKVDDDNRTLVQTGISCKENLDTLSFMLEPSSLLAPAAVCVGDPSSQCETSQPTRSSEIPVLESGNTDTLHDPFLLTNPGNLIESNHDSTTSPTDTIIEKITPDSKALVAIPISPEALAVVPVNQKTKRAEIAQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEQVPQELLDRVLAAHGYWSQHQAKQNGKHQAIAGSVECVQSLVMV* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0643 663 Gene3D - 544 648 - -
Lan16g0643 663 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 551 610 IPR017930 -
Lan16g0643 663 SUPERFAMILY Ubiquitin-like 366 435 IPR029071 -
Lan16g0643 663 SUPERFAMILY Homeodomain-like 557 638 IPR009057 -
Lan16g0643 663 MobiDBLite consensus disorder prediction 332 362 - -
Lan16g0643 663 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 656 - -
Lan16g0643 663 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 656 IPR031105 -
Lan16g0643 663 ProSiteProfiles Ubiquitin domain profile. 369 434 IPR000626 GO:0005515
Lan16g0643 663 SMART sant 555 608 IPR001005 -
Lan16g0643 663 MobiDBLite consensus disorder prediction 332 363 - -
Lan16g0643 663 CDD SANT_TRF 557 607 - -
Lan16g0643 663 ProSiteProfiles Myb-like domain profile. 551 606 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0643 Lan-Chr16 8297038 8302104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0643 - - gmx:100814318 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0187 4 3108821 3114208 Lan16g0643 16 8297038 8302104 LSH