Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0176 ATGATTTCCCCAATCAATGTAGATTTTGTAAGAACCCCAGTCACTCTCAAAATCGTAGCTTTCTTCTTCCTCTCCATCACTTTCTTCTACTTCGGTTATCACTGGTTCGACGGTTTCAACCAACTCACTTTCTTCTCCGATTCCCAATCCCCGAATCCCTTTGTAACCCTTTCCCCAAATTACAACAAATCCTTCAATATCCCCGCCCTAATCGACCACCACCCACCGCCGGTTGCGGCGGCGCCTCATCCAATTGCACCGCCGGTGGCGGCAGTGACTGATTCAATTGTACCACCGGTGGCGGCGGCGGCGGTGAATGATTCAATTGCACCACCGGTGGCGGCAGTGAATGATTCGGCTGTGCCACCGGTGGCGGCAGTGAATAATTCGGTTGTGCCACCGGTGGCGGCGGCAGCGTCTGATTCGATTGTGAAATTTGGGATCGTGAATGAGAATGGGTCGATGTCTGATGAATTTGAGGTCGGGGATATGAATGTGAGTGATTGGGTTAACGAGACTAATAAAGTTGGTGGTTCTTCAGCTTCTGATTATGCGAAATCTGTGATCAAGAAATTTGAGGTGTGTCCGTTGAGTATGAGTGAATATATACCGTGTTTGGATAATGTAGATGCGATTCGGAAGCTGAAATCAACGGAGAAAGGGGAAAGGTTTGAACGGCATTGTCCGGAGAAGGGTGGAGGGTTGAATTGCTTGGTTCCTTCGCCCAAAGGGTACCGTACTCCTATTATATGGCCTAGAAGCAGAGATGAGGTGTGGTATAACAATGTTCCTCACACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTACCAGAGACAATGACAAGTTTAAGTTTCCAGGAGGTGGTACACAATTTATACATGGGGCAGATGAATACTTGGACCATATTTCCAGGATAATTCCTGGAATTACATTTGGTCAGCATATACGAGTTGTTCTTGATGTTGGTTGTGGTGTAGCTAGTTTTGGTGCATACTTACTGTCACGGAATGTCCTCACCATGTCCGTTGCTCCTAAGGATGTTCATGAGAATCAGATCCAATTTGCTCTCGAGCGTGGTGTACCGGCAATGGCAGCAGCATTTGCTACTAGACGTTTATTATATCCAAGCCAAGCTTTTGACTTGATGCATTGTTCACGCTGTAGAATTAATTGGACACGAGATGATGGAATATTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGGGGTTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAACACGGGGAAGTTTTACGAGAACAATGGGAAGAGATGCTTAATCTGACTACCCGACTTTGCTGGAAGTTTCTGAAAAAAGATGGGTACATTGCAATATGGCAGAAACCTTTTGACAATAGCTGTTATATAAATCGTGAGGCAGGAACTAAACCTCCACTGTGTGACTCAAGTGATGACCCTGACAATGTTTGGTATGTTGATCTGAAAGCATGCATCTCTCGTTTGCCTGAGAACGGAAACCGTGCAAATGTTACCAGATGGCCTGCACGTTTACAAAGTCCACCCAATAGACTTCAAAGCATAAAAATGGATGCTTTCATGTCCAGGAATGAGCTATTTAAGGCAGAATCAAAATACTGGGATGCGATAATAGATAACTATGTTAGTTTTTTAGATTGGAAGAAATTAACATTACGAAATGTTATGGACATGCGAGCTGGCTTTGGAGGATTTGCAGCAGCATTGATTAATCAGAATCTTAGCAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAACACCCTGCCAGTTATATATGACCGTGGTTTAATTGGAGCTATGCATGATTGGTGTGAAGCATTTGACACCTACCCAAGAACCTACGATTTACTGCATGCAGCAAACCTGCTTTCTGTTGAGAGGAAAAGATGCAGTCTCTCATCAATTATGCTCGAGATGGATCGGATTCTAAGACCTGGTGGACGTGCATACATCCGGGATTCTCTAGAAATCATGGAGGAACTACAAGAGATCGGCAAGGCAATGGGCTGGCACGTGACATTACGTGATACAGCTGAGGGACCCTATGCACGTTACAGAGTCTTGGTTTGTGATAAGAACCAGTTAGGTACATGA 2130 0.4493 MISPINVDFVRTPVTLKIVAFFFLSITFFYFGYHWFDGFNQLTFFSDSQSPNPFVTLSPNYNKSFNIPALIDHHPPPVAAAPHPIAPPVAAVTDSIVPPVAAAAVNDSIAPPVAAVNDSAVPPVAAVNNSVVPPVAAAASDSIVKFGIVNENGSMSDEFEVGDMNVSDWVNETNKVGGSSASDYAKSVIKKFEVCPLSMSEYIPCLDNVDAIRKLKSTEKGERFERHCPEKGGGLNCLVPSPKGYRTPIIWPRSRDEVWYNNVPHTRLVEDKGGQNWITRDNDKFKFPGGGTQFIHGADEYLDHISRIIPGITFGQHIRVVLDVGCGVASFGAYLLSRNVLTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLMHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHGEVLREQWEEMLNLTTRLCWKFLKKDGYIAIWQKPFDNSCYINREAGTKPPLCDSSDDPDNVWYVDLKACISRLPENGNRANVTRWPARLQSPPNRLQSIKMDAFMSRNELFKAESKYWDAIIDNYVSFLDWKKLTLRNVMDMRAGFGGFAAALINQNLSSWVMNVVPVSGPNTLPVIYDRGLIGAMHDWCEAFDTYPRTYDLLHAANLLSVERKRCSLSSIMLEMDRILRPGGRAYIRDSLEIMEELQEIGKAMGWHVTLRDTAEGPYARYRVLVCDKNQLGT* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0176 709 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 201 704 IPR004159 GO:0008168
Lan4g0176 709 PANTHER METHYLTRANSFERASE PMT12-RELATED 123 706 - -
Lan4g0176 709 PANTHER METHYLTRANSFERASE PMT12-RELATED 15 90 - -
Lan4g0176 709 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 225 442 IPR029063 -
Lan4g0176 709 Gene3D Vaccinia Virus protein VP39 299 464 IPR029063 -
Lan4g0176 709 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 542 685 IPR029063 -
Lan4g0176 709 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 123 706 IPR004159 GO:0008168
Lan4g0176 709 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 90 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0176 Lan-Chr4 2866703 2872048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0176 - - gmx:100800414 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0176 4 2866703 2872048 Lan16g0660 16 8677588 8684172 LSH
Lan4g0176 4 2866703 2872048 Lan2g1107 2 22360122 22365243 PCT
Lan4g0176 4 2866703 2872048 Lan11g0272 11 1778991 1784487 PCT
Lan2g1107 2 22360122 22365243 Lan4g0176 4 2866703 2872048 PCT
Lan11g0272 11 1778991 1784487 Lan4g0176 4 2866703 2872048 PCT