LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g0272	ATGAAGATCGATTTGGTGAAATCATCTTTGGTTCTGAAAATCACGACTGTCTTGTTGGTCTCAGTAACTTTCTTGTTCTTATTCTTTAGTAAACAATTGTCCCAATCCGACGGTTACCATCACCTCATCTTCTTCACTTCTAACATCACTACTTCACCCTCTTCACCCTCTTCCCCAATCGTCCACGTCCAAACCACACACCCTCCACAACCCTCCATTTCACCGCCACCCTCCATTTCACCGCCGCTTCCCAATTCACCGCCTCCGTCCGCTTCACCCCCACCACCTCCATCCGCTTCACTCCCACCACCTCCGCCGCCCGCTTCTCCGCAACCCCCGCCGCCCGCCTCTCCGCCACCTCCGCCGTCCACTTCTCCGCCACCGCCTCTGCCCACTTCTCCGCCGCCGCCGCCGAGGGACTTGTTTAAGAAATTCGGGATTGTGAACGAGAATGGGACAATGTCTGACGAATTTGAGGTTGGGGAATTTGATCCTGAGATGGTGGATAGTGATCAGGTTCAGAATTCTGCTTTGCCTAATGCTCCCAAATTTAAGATCAACAGCTTTGGAGTTTGCCCTGGTAGCATGCACAACTACATACCTTGTTTGGAGAGAGGGGAGAGATTCGAGCGCCATTGTCCTCCACACGACAAAGGCTTGAATTGTTTGGTTCCTCCGCCTAAAAGGTACCGTAATCGAATACCGTGGCCAAAAAGCCGTGATGAGGTGTGGTACAACAATGTTGCTCACACTAAGCTTGTTGATGGTAAACGGGGCCAAAACTTGATTTCCAACCCCAAAGCTAAGTTTAAATTTCCAAGGGAAGATACCCAGTTTATACATGGAGTTGATCAGTATTTGGACCATATTTCGAAGATGGTTCCTGAAATTACATTTGGTCAGCATATAAGAGTTGCTCTTGATGTTGGCTGCGGCTTGGCTAGTTTTGGTGCATACTTACTATCACGAAATGTTATCACCATGTCTGTTGCTTCCAAGGACGTTCATGAGAATCAGATCCAATTTGCTCTTGAGCGTGGTGTACCAGCAATGGTGGCCGCATTTGCAACCAGGCGTTTATTATATCCAAGCCAAGCTTTTGACTTGATACATTGTTCGCGCTGTAGAATTAATTGGACTCAAGATGATGGTATTTTGCTACTTGAAGCTAATAGGATTCTAAGGGCAGGAGGGTACTTTGTCTGGGACGCTCAACCAGTTCATAAGCAGAAGGAGGCTTTAGAAGAACAATGGGAAGAGATGGTTAATCTTACTACTCGTCTATGCTGGAAGTTTCTGAAAAAAGATGGTTACGTCACAGTATGGAAGAAACCTTCTGACAATAGCTGCTATCTACGCCGTGAGGCAGGAACCAAACCTCCACTATGCGACCCACGTGATGATCCAGACAATATTTGGTATATTAATCTAAAAGCATGCATCTCTCCATTGCCTGAGAATGGATATGGAGCAAATGTTACCAGATGGCCTGCACGATTGCAAACCCCACCTGATAGGCTTCAAAGCATAAAAATTGACGCTTTCTTATCCAGAAAAGAGCTTTTTAAGGCAGAATCAAAATACTGGAATCAGATATTAGAAGGATATGTACGGGCATTACACTGGAAGAAGATGAAATTAAGAAATGTTATGGACATGAGAGCTAGTTTTGGAGGATTTGCGGCTGCATTGATTGATCGGAAGCTTGACTGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAATACCTTGCCTGTTATATATGACCGTGGACTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACATACCCAAGAACCTATGATTTATTGCACGCTGCAAACTTGCTTTCTGTTGAGAAGAAAAGATGTAATGTGTCATCAATTATGCTGGAGATGGATCGGATACTAAGGCCTGGTGGACGAGTATACATTCGCGATTCTCTTGTTATAATGGATGAACTTGTAGAGATTGGCAAGGCTCTGGGCTGGCGCTTGACATTGCGAAATACAGATGAAGGTCCTCATTCAAGTTATAGGGTCTTGGTTTGTGATAAGCGTATACGAAAGTTTTGA	2085	0.4537	MKIDLVKSSLVLKITTVLLVSVTFLFLFFSKQLSQSDGYHHLIFFTSNITTSPSSPSSPIVHVQTTHPPQPSISPPPSISPPLPNSPPPSASPPPPPSASLPPPPPPASPQPPPPASPPPPPSTSPPPPLPTSPPPPPRDLFKKFGIVNENGTMSDEFEVGEFDPEMVDSDQVQNSALPNAPKFKINSFGVCPGSMHNYIPCLERGERFERHCPPHDKGLNCLVPPPKRYRNRIPWPKSRDEVWYNNVAHTKLVDGKRGQNLISNPKAKFKFPREDTQFIHGVDQYLDHISKMVPEITFGQHIRVALDVGCGLASFGAYLLSRNVITMSVASKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTQDDGILLLEANRILRAGGYFVWDAQPVHKQKEALEEQWEEMVNLTTRLCWKFLKKDGYVTVWKKPSDNSCYLRREAGTKPPLCDPRDDPDNIWYINLKACISPLPENGYGANVTRWPARLQTPPDRLQSIKIDAFLSRKELFKAESKYWNQILEGYVRALHWKKMKLRNVMDMRASFGGFAAALIDRKLDCWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGRVYIRDSLVIMDELVEIGKALGWRLTLRNTDEGPHSSYRVLVCDKRIRKF*	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan11g0272	694	MobiDBLite	consensus disorder prediction	69	141	-	-
	Lan11g0272	694	MobiDBLite	consensus disorder prediction	51	144	-	-
	Lan11g0272	694	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	125	692	IPR004159	GO:0008168
	Lan11g0272	694	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	210	419	IPR029063	-
	Lan11g0272	694	PRINTS	Proline rich extensin signature	63	75	-	-
	Lan11g0272	694	PRINTS	Proline rich extensin signature	81	97	-	-
	Lan11g0272	694	PRINTS	Proline rich extensin signature	103	115	-	-
	Lan11g0272	694	PRINTS	Proline rich extensin signature	115	136	-	-
	Lan11g0272	694	Gene3D	Vaccinia Virus protein VP39	282	448	IPR029063	-
	Lan11g0272	694	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	523	668	IPR029063	-
	Lan11g0272	694	PANTHER	METHYLTRANSFERASE PMT12-RELATED	125	692	-	-
	Lan11g0272	694	MobiDBLite	consensus disorder prediction	51	68	-	-
	Lan11g0272	694	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	102	450	-	-
	Lan11g0272	694	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	203	689	IPR004159	GO:0008168

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g0272	Lan-Chr11	1778991	1784487	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g0272	-		-	lang:109340023	1012.29

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan11g0272	11	1778991	1784487	Lan11g0272	11	1778991	1784487	ECH
	Lan2g1107	2	22360122	22365243	Lan11g0272	11	1778991	1784487	LSH
	Lan4g0176	4	2866703	2872048	Lan11g0272	11	1778991	1784487	PCT
	Lan16g0660	16	8677588	8684172	Lan11g0272	11	1778991	1784487	PCT
	Lan11g0272	11	1778991	1784487	Lan4g0176	4	2866703	2872048	PCT
	Lan11g0272	11	1778991	1784487	Lan16g0660	16	8677588	8684172	PCT