Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0174 ATGGCTATGAATGGTGATGGGAATGAACCATTGAAGAAGAAAAGGTTGGTGTATATGTGGGGTTACCTTCCCGGAGCTCTGCCGCAGAGGACGCCGCTATTGACTCCGGTACTTGTTAGGGTTCCGCCGTCTAATTACTCGTGGGTGGATGTTTCCGGTGGTGGTTGTGGATTTGCTATGGCTATCTCTGAGTCAGGGAAGCTCATAACATGGGGTTCAACTGATGATCTAGGCCAAAGCTATGTGACATCTGGCAAGCATGGGGAAACTCCAGAGCCTTTTCCACTTCCAAATGAAGCATCTATTGTAAAAGCGGCAGCTGGATGGGCACATTGTGTTGCTGTAACAGATTGTGGAGAAGTGTACACATGGGGATGGAAAGAATGTGTTCCCTCTGGAAAGGTATTTGTTGAACCATCAGCGGGGGTAAGTGTTGAAAAAGATGTACCAGGAAGGCAGAGTTTATTCTTGGTGGAGCAAGGAACTGTCACCACCAGCACTAGTGGAGAAGAAAATACAAAGCGAAGGAGAATATCTTCAGCGAAGCAAGCAGCTGAAACCTCATCACCTGGTGATGATGTTCTGACAGCATTACCATGTCTTGTCACACTAAACCCAGGGGTAAGGATATCAAGTGTTGCTGCTGGTGGACGCCACACCCTAGCTTTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGACAACTTGGTTTGGGTTCCAGAGTGCGTATGGTATCGTCTCCTCAGCTTCTTCCTTGTATTGATTCCTCTTCTTATGTTAAGGATAGATCAGCATCACTGGATCAAGGAAGCATGAGCTCAGATGGACAGAATTTAAGAGTTCCTGGAAGTTATGTAAAAGGAATTGCCTGTGGAGGTCGACACAGCACAGTAATCACAGATGCTGGAGCTGTGCTTGCTTTTGGTTGGGGACTTTATGGACAGTGTGGGCAAGGAAGTACAGACGATGAACTGAGACCGACTTGCGTATCTTCCTTATTGGGTATCCGAATAGAGGGAGTTGCTGCAGGACTGTGGCATACTGTCTGTATATCTGCTGATGGTGATGTCTATGCATTTGGTGGAAACCAATTTGGGCAGCTAGGAACCGGTGTTGATCAAGCTGAGACTCTACCAAAGTTACTGGATTGTCCGAGCTTGGAAAATGTGAATGTAAAAAGTGTATCTTGTGGGGCTCGTCATACTGCTGCAGTGACAGATGATGGGAAAGTCTTCTGCTGGGGATGGAACAAGTATGGACAGCTGGGACTCGGGGACGTGATAGACCGTAATATTCCTTCTGAAGTCACCATTGAAGGTTGCACCGCTAAAAATGTTGCATGCGGCTGGTGGCACACTCTTCTCCTGGCCGAATCACCTACCTGA 1398 0.4764 MAMNGDGNEPLKKKRLVYMWGYLPGALPQRTPLLTPVLVRVPPSNYSWVDVSGGGCGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPNEASIVKAAAGWAHCVAVTDCGEVYTWGWKECVPSGKVFVEPSAGVSVEKDVPGRQSLFLVEQGTVTTSTSGEENTKRRRISSAKQAAETSSPGDDVLTALPCLVTLNPGVRISSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRMVSSPQLLPCIDSSSYVKDRSASLDQGSMSSDGQNLRVPGSYVKGIACGGRHSTVITDAGAVLAFGWGLYGQCGQGSTDDELRPTCVSSLLGIRIEGVAAGLWHTVCISADGDVYAFGGNQFGQLGTGVDQAETLPKLLDCPSLENVNVKSVSCGARHTAAVTDDGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCTAKNVACGWWHTLLLAESPT* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0174 465 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 413 463 IPR000408 -
Lan4g0174 465 Pfam Regulator of chromosome condensation (RCC1) repeat 210 239 - -
Lan4g0174 465 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 213 223 IPR000408 -
Lan4g0174 465 Pfam Regulator of chromosome condensation (RCC1) repeat 358 409 IPR000408 -
Lan4g0174 465 Pfam Regulator of chromosome condensation (RCC1) repeat 307 355 IPR000408 -
Lan4g0174 465 Pfam Regulator of chromosome condensation (RCC1) repeat 412 460 IPR000408 -
Lan4g0174 465 Gene3D - 269 465 IPR009091 -
Lan4g0174 465 Gene3D - 189 268 IPR009091 -
Lan4g0174 465 Gene3D - 5 188 IPR009091 -
Lan4g0174 465 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 307 358 IPR000408 -
Lan4g0174 465 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 345 355 IPR000408 -
Lan4g0174 465 PRINTS Chromosome condensation regulator RCC1 signature 102 115 IPR000408 -
Lan4g0174 465 PRINTS Chromosome condensation regulator RCC1 signature 213 229 IPR000408 -
Lan4g0174 465 PRINTS Chromosome condensation regulator RCC1 signature 348 366 IPR000408 -
Lan4g0174 465 PRINTS Chromosome condensation regulator RCC1 signature 408 429 IPR000408 -
Lan4g0174 465 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 12 465 - -
Lan4g0174 465 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 227 306 IPR000408 -
Lan4g0174 465 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 399 409 IPR000408 -
Lan4g0174 465 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 12 465 - -
Lan4g0174 465 SUPERFAMILY RCC1/BLIP-II 17 251 IPR009091 -
Lan4g0174 465 SUPERFAMILY RCC1/BLIP-II 197 462 IPR009091 -
Lan4g0174 465 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 66 118 IPR000408 -
Lan4g0174 465 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 359 412 IPR000408 -
Lan4g0174 465 MobiDBLite consensus disorder prediction 162 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0174 Lan-Chr4 2835492 2842294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0174 - - gmx:100778841 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0174 4 2835492 2842294 Lan2g1108 2 22374809 22383820 PCT
Lan2g1108 2 22374809 22383820 Lan4g0174 4 2835492 2842294 PCT