Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1108 ATGAATGTAAGTGGAGGAGTTGAAGTAAGACATGGTCAGAAAATGGTTTACATGTGTGGTTATCTTCCCGGTGCTACGACGCAGAGGTTGCCTCTGTTGTCTCCGGTGGCGGTTAATTTTCCGGGGACTTGTTATTCATGGAATGATGTTTGTGGTGGTGGCTGTGGATTTGCAATGGCTCTATCTGAGTCAGGAAAACTCATCACATGGGGTTCAACTAATGATCTAGGCCAAAGCTATCTAACTTCAGGCAAACATGGGGAAATTCCGGAGCCTTTCCCTCTTCCTCCTGAAGCCTATATCGTAAATGCTGCAGCTGGATGGGCTCATTGTGTAACTGTAACAGATTGTGGAGAAGTTTACACATGGGGATGGAAAGAATGTATACCCTCTGGGAAGGTATTTGGTGAACCATCTATAGGGATAAGTCTTGAACAAGATGTACCAGGATGGCAGAGTTCATTGTCAACAGAGCAAGTGAGCCCTCGTTGTCAAGGTTCAAGATCTACCGAAGGTACTGCCTCGACTACCAGCGGAGAAGATAGCATGAAGCGACGGAGAGTCTCTTCAGCAAAGCAAACTGCTGAAAGCTCGTCATCCGGTGATGATACTCTGACAGCATTGCCTTGTCTTGTAACACTGAATCCGGGTGTAAGGATAGCAAGTGTTGCTGCTGGTGGACGTCATACCTTAGCATTGTCAGATATAGGACAGGTTTGGGGTTGGGGCTATGGAGGTGAAGGGCAACTTGGTTTGGGTTCCAGAATACGTATGGTCTCCTCTCCTCATCTTGTTCCTTGTATTGATTCCACTTCTTATGGTAAAGATAGATCTACGACACTGGCTCGAGGAAGAATGTGTTCAGAGGGACAGGGTTTAAGAGCCCCTGGAAGTTATGTAAAGGGCATTGCTTGTGGAGGTCGACACAGTGTGGTGATTACAGATGCTGGAGCTTTGCTTACTTTTGGTTGGGGACTCTATGGGCAGAATATGGTGGACAAAAGCAATGTAGATGTTGAAGATGAGTGTGGGCAAGGAACTACAGATGATGAACTAAGCCCGACTTGCGTATCTTCCCTCTTGGGTATCCGAATAGATGGAGTCGCTGCAGGACTATGGCATACCGTATGTACATCTGCTGCTGGTGATGTATATGTGTTTGGTGGGAATCAATTCGGGCAACTGGGAACTGGCTCTGATCAAGCTGAGGTTCTACCGAGACTAGTAGATTCTCCAAACTTGGAAAACATGCATGCAAAGAACATATCTTGTGGTTCTCGTCATACTGCTTTACTAACAGAGGGTGGCAAAGTCTTCTGCTGGGGATGGAACAAATATGGACAGCTGGGCCTCGGGGACGTGATTGACCGTAAAATTCCTTCTGAGGTCGCCATTGAAGGTTATGTCCCTAAAAATGTTGCTTGTGGTTGGTGGCATACTCTTCTTCTGGCCTGA 1455 0.4674 MNVSGGVEVRHGQKMVYMCGYLPGATTQRLPLLSPVAVNFPGTCYSWNDVCGGGCGFAMALSESGKLITWGSTNDLGQSYLTSGKHGEIPEPFPLPPEAYIVNAAAGWAHCVTVTDCGEVYTWGWKECIPSGKVFGEPSIGISLEQDVPGWQSSLSTEQVSPRCQGSRSTEGTASTTSGEDSMKRRRVSSAKQTAESSSSGDDTLTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCIDSTSYGKDRSTTLARGRMCSEGQGLRAPGSYVKGIACGGRHSVVITDAGALLTFGWGLYGQNMVDKSNVDVEDECGQGTTDDELSPTCVSSLLGIRIDGVAAGLWHTVCTSAAGDVYVFGGNQFGQLGTGSDQAEVLPRLVDSPNLENMHAKNISCGSRHTALLTEGGKVFCWGWNKYGQLGLGDVIDRKIPSEVAIEGYVPKNVACGWWHTLLLA* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1108 484 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 422 432 IPR000408 -
Lan2g1108 484 Gene3D - 11 134 IPR009091 -
Lan2g1108 484 PRINTS Chromosome condensation regulator RCC1 signature 220 233 IPR000408 -
Lan2g1108 484 PRINTS Chromosome condensation regulator RCC1 signature 239 255 IPR000408 -
Lan2g1108 484 PRINTS Chromosome condensation regulator RCC1 signature 368 384 IPR000408 -
Lan2g1108 484 PRINTS Chromosome condensation regulator RCC1 signature 384 398 IPR000408 -
Lan2g1108 484 PRINTS Chromosome condensation regulator RCC1 signature 476 484 IPR000408 -
Lan2g1108 484 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 11 484 - -
Lan2g1108 484 Gene3D - 338 484 IPR009091 -
Lan2g1108 484 Gene3D - 172 337 IPR009091 -
Lan2g1108 484 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 382 435 IPR000408 -
Lan2g1108 484 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 65 117 IPR000408 -
Lan2g1108 484 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 303 313 IPR000408 -
Lan2g1108 484 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 11 484 - -
Lan2g1108 484 MobiDBLite consensus disorder prediction 154 179 - -
Lan2g1108 484 Pfam Regulator of chromosome condensation (RCC1) repeat 436 483 IPR000408 -
Lan2g1108 484 Pfam Regulator of chromosome condensation (RCC1) repeat 382 432 IPR000408 -
Lan2g1108 484 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 223 233 IPR000408 -
Lan2g1108 484 SUPERFAMILY RCC1/BLIP-II 31 483 IPR009091 -
Lan2g1108 484 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 436 484 IPR000408 -
Lan2g1108 484 MobiDBLite consensus disorder prediction 154 202 - -
Lan2g1108 484 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 237 316 IPR000408 -
Lan2g1108 484 Pfam Regulator of chromosome condensation (RCC1) repeat 300 329 - -
Lan2g1108 484 Pfam Regulator of chromosome condensation (RCC1) repeat 220 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1108 Lan-Chr2 22374809 22383820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1108 - - gmx:100807837 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0174 4 2835492 2842294 Lan2g1108 2 22374809 22383820 PCT
Lan2g1108 2 22374809 22383820 Lan4g0174 4 2835492 2842294 PCT