Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0162 ATGGGAAAGAGCAACGCTGAAAATGATTCTACGAAAGATGCTACCGTGGACATTGAAGTACCAGATACTGCTCATCAAATTAGCACCGATTCATGGTTTCAAGTAGCTTTTATCCTCACCACCGGAGTGAACAGTGCTTATGTACTAGGATATTCCGGGAGCATCATGGTTCCGCTGGGTTGGGTAGGGGGTGTAGTTGGTCTAGTTCTTGCCACTGCAATTTCACTCTATGCAAATAGTCTTATTGCTAAGCTCCATGAACATGGAGGGGTGAGACACATTAGATATAGAGATCTTGCTAGACACATATACGGTAGGAAAGCATATGCTCTCACATGGGCTTTGCAGTATGTCAATCTTTTCATGATAAATACTGGCTATATCATTTTGGCTGGTTCAGCCTTGAAAGCTCTTTATTTTCTCTTTAGAGATGATGATCAGATGAAGCTTCCATATTGTATTACCATAGCTGGAGTTGCGTGCGGAATGTTTGCCATTTCTGTTCCTCATCTTTCAGCTCTCGGAATTTGGTTGGGAGTTTCAACTATCCTCACTGTAATTTATGTTCTTATAGCAGTTGTGCTGTCAATTAAAGATGGAATACAATCACCAGCTCGAGATTACAGCATTCCAGGAGATGGTGCAAGTAAAGCATTTACCATAATTGGGTCTTCTGCTAGTCTTGTTTTCGCATTTAATACTGGCATGGTCCCTGAGATACAGGCAACGATTAGGGAACCAGTTGTGAAGAACATGATGAAAGCCCTGAAGTTTCAGTTCACCATTGGACTTCTTCCATTTTTCTTGATTATCTTTGCCGGATACTGGGCTTATGGATCTTCTACCGGAACCTATTTGCTGAATAATGTGACCGGTCCAGTCTGGGTGAAGAGCTTAGGCCATATTTCAGCTTTTCTTCAAGCAGTCATTGCATTGCATATATTTGCTAGCCCTATGTATGAGTTTTGGGATACTAAATTTGGGATCAAAGGAAGCGCACTGAATATTAAGAACTTGTCATTTCGGTTCATGGTAAGAGGTGGCTACTTGATCTTCAATACATTCGTGGCAGCGCTACTCCCGTTCCTTGGAGATTTCATGAGCCTCACGGGGGCTATCAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTAGTGGCAATGGGGGACAAACTTGCATCTTCACAAAAGCTCTGGCACTGGTTTAACATTGTTTTATTTAGCATGGCATCGCTTGCAGCAACAATTGCAGCCATACGACTTATTGTCGTAGACTCCAAAACATACCATGTTTTTGCTAATGTGTGA 1317 0.4199 MGKSNAENDSTKDATVDIEVPDTAHQISTDSWFQVAFILTTGVNSAYVLGYSGSIMVPLGWVGGVVGLVLATAISLYANSLIAKLHEHGGVRHIRYRDLARHIYGRKAYALTWALQYVNLFMINTGYIILAGSALKALYFLFRDDDQMKLPYCITIAGVACGMFAISVPHLSALGIWLGVSTILTVIYVLIAVVLSIKDGIQSPARDYSIPGDGASKAFTIIGSSASLVFAFNTGMVPEIQATIREPVVKNMMKALKFQFTIGLLPFFLIIFAGYWAYGSSTGTYLLNNVTGPVWVKSLGHISAFLQAVIALHIFASPMYEFWDTKFGIKGSALNIKNLSFRFMVRGGYLIFNTFVAALLPFLGDFMSLTGAISTFPLTFILANHMYLVAMGDKLASSQKLWHWFNIVLFSMASLAATIAAIRLIVVDSKTYHVFANV* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0162 438 PANTHER OS05G0424000 PROTEIN-RELATED 14 433 - -
Lan4g0162 438 Pfam Transmembrane amino acid transporter protein 29 421 IPR013057 -
Lan4g0162 438 PANTHER PROLINE TRANSPORTER 1 14 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0162 Lan-Chr4 2579741 2585424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0162 56 438 Organic Solute Cotransporters AT3G55740 72.063 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0162 - - gmx:100778997 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0162 4 2579741 2585424 Lan16g0683 16 9167640 9179708 LSH
Lan4g0162 4 2579741 2585424 Lan11g0261 11 1677330 1681214 PCT
Lan11g0261 11 1677330 1681214 Lan4g0162 4 2579741 2585424 PCT