Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0683 ATGGGGAAGGGAAACGCTGAAAACAATTCTACTAAGGTTTATGCCAAAGAGGATCCTACAGATATTGAAGTCCCAGATACCGCACATAAGATTAACAGCGATTCATGGGTTCAAGTAGCTTTTGTCCTCACCTCAGGAGTAACAGGCGCCTTTGTGCTCGGATATTCTGGGACTATCATGGTTCCCCTGGGTTGGGTAGGGGGTGTAGTTGGTCTAGTTCTTGCAAATGCAATATCATTTCATGCAAATGCTCTTGTTGCTAAGCTCCATGAACATGGAGGGGTAAAGCACATTAGATATAGAGATCTTGCTGGATACCTATATGGTAAGAAAGCATATTCTCTCACATGGATTATGCAGTATATCAATCTCTTCATGATTAATACTGGCTATATCATTTTGGCTGGTTCATCCTTAAAAGCTTTTTATATTCTATTTAGGGATGATGATCAGATGAAGCTTCCACATTTTATTGCCATAGCTGGAGTTGCATGTGGAATGTTTGCTATTTGTGTTCCCCATCTTTCAGCTCTTGGAATTTGGCTTGGAGTTTCAGTTGTCCTCACCATAATATATTCTGTTATAGCAGTTGTGCTGTCAATTAAAGATGGATTACGATCACCAGCTCGAGATTACAGTATTCCAGGGGAAGGTGCAAGTAAAATATTTACAACAATTGCTGCAACTGCAAGTCTTGTTTTCGCATTTAATACTAGCATGATCCCTGAGATACAGGCAACAATTAGGGAACCAGTTGTGAAGAACATGATGAAAGCACTATGTTTTCAGTTCACTATTGGTGCTATACCATTTTTTGTGGTTGTCTTTGTAGGATACTGGGCATATGGATCTTCCACGGGAACCTATTTGTTGAATAATGTTAATGGACCTGTCTGGGTGAAAGGCTTAGCCAATATTGGAGCATTTTTTCAAGGAGTCATTACATTGCATAAAACTGATGGGAAAGGGTTACCACGTTTAGTCGTCTCTAACTACTTCACGCTATGCATGGTTTGGATAAATAGAGAAGGAAGGAAGGAAGTGGAGATATTTGCTAGTCCTATCTATGAGTATGTGGATACTGTGTATGGGATCAAAGGAAGCTCACTGAAAACCAAGAACTTATCATTTCGAATTTTGGTGAGAGGTGGCTACTTGATTTTCAATACATTTGTGGCAGCACTACTTCCATTCCTTGGAGATTTCATTAGCCTCACTGGTGCTGCAAGCATATTGCCCCTTACATTTATTCTTGCAAACCATATGTACCTTGTGGCAAAGGAGAATAAGCTTACATCTATAGAAAAGCTATGGCATTGGTTCAACATTGTTTTCTTTAGCATAGTATCCCTTGCAGCAACAATTGCAGCTATATGGCTTATTGTTGATCACTCCAGAACATACCATGTTTTTGCTGATATGTGA 1425 0.3965 MGKGNAENNSTKVYAKEDPTDIEVPDTAHKINSDSWVQVAFVLTSGVTGAFVLGYSGTIMVPLGWVGGVVGLVLANAISFHANALVAKLHEHGGVKHIRYRDLAGYLYGKKAYSLTWIMQYINLFMINTGYIILAGSSLKAFYILFRDDDQMKLPHFIAIAGVACGMFAICVPHLSALGIWLGVSVVLTIIYSVIAVVLSIKDGLRSPARDYSIPGEGASKIFTTIAATASLVFAFNTSMIPEIQATIREPVVKNMMKALCFQFTIGAIPFFVVVFVGYWAYGSSTGTYLLNNVNGPVWVKGLANIGAFFQGVITLHKTDGKGLPRLVVSNYFTLCMVWINREGRKEVEIFASPIYEYVDTVYGIKGSSLKTKNLSFRILVRGGYLIFNTFVAALLPFLGDFISLTGAASILPLTFILANHMYLVAKENKLTSIEKLWHWFNIVFFSIVSLAATIAAIWLIVDHSRTYHVFADM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0683 474 Pfam Transmembrane amino acid transporter protein 34 315 IPR013057 -
Lan16g0683 474 Pfam Transmembrane amino acid transporter protein 349 459 IPR013057 -
Lan16g0683 474 PANTHER PROLINE TRANSPORTER 1 348 465 - -
Lan16g0683 474 PANTHER PROLINE TRANSPORTER 1 6 316 - -
Lan16g0683 474 PANTHER OS05G0424000 PROTEIN-RELATED 348 465 - -
Lan16g0683 474 PANTHER OS05G0424000 PROTEIN-RELATED 6 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0683 Lan-Chr16 9167640 9179708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0683 60 474 Organic Solute Cotransporters AT2G39890 62.651 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0683 - - lang:109329294 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0162 4 2579741 2585424 Lan16g0683 16 9167640 9179708 LSH
Lan16g0683 16 9167640 9179708 Lan11g0261 11 1677330 1681214 PCT
Lan11g0261 11 1677330 1681214 Lan16g0683 16 9167640 9179708 PCT