Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0154 ATGAATTACGACGGTAACGTGATGAGGATAGACTTAATCCTCGACTGCGTCATTCCTTATATCAACGATCCTAAGGACCGCGACGCCGTTTCACAAGTATGCCGGCGGTGGTATGAGCTTGATTCTCTAACGCGAAAACATGTTACCATCGCGCTCTGTTACACCACCACGCCGGAACGCCTCCGCCGGCGCTTCCCTCACCTAGAGTCGCTGAAACTGAAGGGAAAGCCGAGGGCGGCAATGTTTAACTTGATACCGGAGGATTGGGGTGGTCACGTGAGTCCTTGGGTGAGAGAGATTTCGCAGCACTTTGATTGCATAAGGAGTCTTCATTTTAGACGAATGATTGTTAGGGATTCGGATCTCGAGCTTCTTGCGCGGACACGTGGTCACGTGCTCCTCACTCTTAAGCTCGACAAGTGTTCCGGTTTTTCTACTCATGGACTTTCTTTCATTGGCCGCTTTTGCAGGAATTTGAGGGTCTTGGTTTTGGAGGAAAGCTCAATTGTTGAGCATGATGGTCAATGGTTGCACGAGCTTGCTTTAAATAATACAGTTCTTGAGACATTGAATTTTTACTTGACAGATATTGCTGAAGTCATAATTCAGGACCTTGAACTTCTAGCTAAAAACTGCCCCAACTTAGTCGCTGTGAGAATTACTGATTGTGAAATCTTAGATCTTAAGATCTTCTTCCGATATGCATCTGCTCTAGAAGAATTTTGTGGAGGTGCTTACAATGAGGAACCAGAAAGGTACTCTGCTGTATCATTACCAGCAAAGTTATGTCGATTGGGTTTAACATATATTGGAAAGAATGAGTTGCCAATAGTGCTCATGTATGCGGCTGTGTTAAAAAAGTTGGATCTCCTCTATGCGATGTTGGATACAGAGGACCATTGTGTGTTGATCCAAAGGTGCCCAAATTTGGAAGTCCTTGAGACAAGGAATGTAATTGGAGATAGAGGATTAGAAGTTCTAGCTCGCTATTGTAGGAAGCTAAAAAGGCTTAGGATCGAGCGAGGTGATGATGATCAGGGAATGGAGGACGAAGAAGGTGTTGTTTCCCAGAGAGGATTAATTGCTTTGTCACAAGGCTGTCCAAAACTTGAATATTTGGCTGTTTATGTATCTGATATTACAAATGCAGCTTTGGAACAGATTGGTACACACTTGAGATATCTTAATGATTTTCGTCTTGTCTTGCTCGATCATGTAGAGGAAATAAATGATTTGCCCCTTGACAATGGAGTGAGGGCTTTACTGACAGGCTGTGACAAGCTTGAAAGATTTGCTCTATATCTCCGACCTGGGGGTTTGACTGATACTGGTCTTGGTTACATCGGAAAATACAGCCAACGTGTGAGATGGATGCTGCTTGGTTTCGTAGGGGAATCTGATGCAGGGCTTTTGGAGTTCTCTAGGGGCTGTCCTAATCTTCAGAAACTTGAAATGAGAGGGTGTTCCTTTTTTAGTGAGCGCGCACTAGCTGTTGCTGTCACTCAACTCACTTCTCTTAGGTACTTTTGGGTGCAAGGGTATGGTGCATCTCGATATGCTGGACGTGACCTTTTGGCAATGGCTCGCCCCTTTTGGAATATCGAGTTGATTCCTTCTAGGCATGTGACAGTCAATAATAATCCGGATGAGCCTGTAACTGTTGAGCATCCAGCTCACATTCTTGCATATTACTCTCTGGTTGGGCAAAGATCAGATTTTCCAGCTAGTGTTATACCTTTGGACCCGGCCACATATGTGGACATGTAG 1767 0.4454 MNYDGNVMRIDLILDCVIPYINDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVSPWVREISQHFDCIRSLHFRRMIVRDSDLELLARTRGHVLLTLKLDKCSGFSTHGLSFIGRFCRNLRVLVLEESSIVEHDGQWLHELALNNTVLETLNFYLTDIAEVIIQDLELLAKNCPNLVAVRITDCEILDLKIFFRYASALEEFCGGAYNEEPERYSAVSLPAKLCRLGLTYIGKNELPIVLMYAAVLKKLDLLYAMLDTEDHCVLIQRCPNLEVLETRNVIGDRGLEVLARYCRKLKRLRIERGDDDQGMEDEEGVVSQRGLIALSQGCPKLEYLAVYVSDITNAALEQIGTHLRYLNDFRLVLLDHVEEINDLPLDNGVRALLTGCDKLERFALYLRPGGLTDTGLGYIGKYSQRVRWMLLGFVGESDAGLLEFSRGCPNLQKLEMRGCSFFSERALAVAVTQLTSLRYFWVQGYGASRYAGRDLLAMARPFWNIELIPSRHVTVNNNPDEPVTVEHPAHILAYYSLVGQRSDFPASVIPLDPATYVDM* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0154 588 SUPERFAMILY RNI-like 360 514 - -
Lan4g0154 588 Gene3D Ribonuclease Inhibitor 46 584 IPR032675 -
Lan4g0154 588 Gene3D - 3 45 - -
Lan4g0154 588 SUPERFAMILY RNI-like 84 390 - -
Lan4g0154 588 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 583 - -
Lan4g0154 588 Pfam Transport inhibitor response 1 protein domain 66 112 IPR041101 -
Lan4g0154 588 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 583 - -
Lan4g0154 588 SMART LRR_CC_2 477 503 IPR006553 -
Lan4g0154 588 SMART LRR_CC_2 367 391 IPR006553 -
Lan4g0154 588 SMART LRR_CC_2 425 451 IPR006553 -
Lan4g0154 588 Pfam F-box 11 47 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0154 Lan-Chr4 2489412 2494686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0154 K13463 - gmx:100779171 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0154 4 2489412 2494686 Lan11g0254 11 1638305 1642324 PCT
Lan4g0154 4 2489412 2494686 Lan9g1320 9 20438473 20442643 PCT
Lan11g0254 11 1638305 1642324 Lan4g0154 4 2489412 2494686 PCT
Lan9g1320 9 20438473 20442643 Lan4g0154 4 2489412 2494686 PCT