Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0091 ATGGGTTCTTGTCCCAACAATCTCCTCATTCCCCATATTACCCTCACTACATTCCTCTATTTCCTCCTCCTATCCCCACCACACCCCACCCTCTCCCTCTCCCTCAACATCACCGCCATCCTCTCCACCTTCCCCGACTTCTCCCACTTCACTTCCCTCCTCTCCGCCGCCACTCCACTCTCCTCCGACCTCTCCCACCGCACCTCCCTCTCTCTCCTCGCCGTCCCTAACTCCATCCTCGACTCCCCTTCCTCCCCTCTCATCACCCACCACATCACTCCCTCCGCCATCCCCGACATCCTCCGCTACCACCTCCTCCTCCAGTTCCTCTCCTGGTCCGACCTCCTCAACCTTCCTCCCTCCGGCAAACTCGTCACCACTCTCCTCCAAACTACTGGACGCGCCCCTAACAATCTAGGTTCCGTGAACATCACGCGCGATCCCGATTCCAACGTTATCTCTATTCACTCTCTTTCACCTTATTCTCCATCAAACGCTACCGTTTTATCACTGGTGAAAACGATTCCTTATAATATCACTATCTTTTCTATTAATTCCCTTCTTATCCCTTCTGGTTTCAATCTCATGACGTCAGAAACTCAACCTAATTTAGGTCTCAATATTACGAAAACGTTGATCGACGGTCACGATTTTAATGTGGCGGCGTCGCTGTTATCGGCTTCCGGTGTTGTTGAAGAATTCGAAGGCGATGAAGGCGGCGCCGGAATTACGATGTTTGTTCCCGTCGATGATGCTTTTGCCGATTTGCCACCGTCGGCGAGCCTTCAATCCTTACCGGCGGATAAGAAAGCTGTTGTGCTCAGGTTTCACGTTCTGCATTCCTATTACACTTTGGGATCATTGGAATCTATTGTGAACCCGGTTCAACCCACGCTCGCCACTGAAACCATGGGTGCTGGGAGTTTCACGCTCAACATTTCACGGCTCAATGGCTCCGTCGCCATCAACACCGGCGTTGTCCAAGCCACCGTGACTCAAACTGTTTTCGATCAGAATCCGGTTGCCATTTTCGGTGTTTCCAAGGTTCTTTTGCCGAGAGAGATATTCGGGAAGAGTATAGTCAGTAAGCCTGGTGGACTGGTTCAGGAAGCACCGCCGCCGGATGCTGATGCTGACACACTTTCGCCGGAGAATTCACCGGGATTCAATGGCCAACCGTCACACCTTTTGTCACCGCCGGGTTTTGGCCAAGAAGTTGGGTCCAAAGCTGCTAATGATGTTTATGGTTTCAAATCCTTTGTTGTTGTGGTTGTTTGCTGTATAGGATTGTATGTAGTGATATGA 1305 0.5119 MGSCPNNLLIPHITLTTFLYFLLLSPPHPTLSLSLNITAILSTFPDFSHFTSLLSAATPLSSDLSHRTSLSLLAVPNSILDSPSSPLITHHITPSAIPDILRYHLLLQFLSWSDLLNLPPSGKLVTTLLQTTGRAPNNLGSVNITRDPDSNVISIHSLSPYSPSNATVLSLVKTIPYNITIFSINSLLIPSGFNLMTSETQPNLGLNITKTLIDGHDFNVAASLLSASGVVEEFEGDEGGAGITMFVPVDDAFADLPPSASLQSLPADKKAVVLRFHVLHSYYTLGSLESIVNPVQPTLATETMGAGSFTLNISRLNGSVAINTGVVQATVTQTVFDQNPVAIFGVSKVLLPREIFGKSIVSKPGGLVQEAPPPDADADTLSPENSPGFNGQPSHLLSPPGFGQEVGSKAANDVYGFKSFVVVVVCCIGLYVVI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0091 434 SMART fasc_3 244 353 IPR000782 -
Lan4g0091 434 SUPERFAMILY FAS1 domain 212 352 IPR036378 -
Lan4g0091 434 Gene3D FAS1 domain 34 191 IPR036378 -
Lan4g0091 434 ProSiteProfiles FAS1/BIgH3 domain profile. 34 188 IPR000782 -
Lan4g0091 434 Gene3D FAS1 domain 195 353 IPR036378 -
Lan4g0091 434 MobiDBLite consensus disorder prediction 366 394 - -
Lan4g0091 434 Pfam Fasciclin domain 217 352 IPR000782 -
Lan4g0091 434 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 8 432 - -
Lan4g0091 434 ProSiteProfiles FAS1/BIgH3 domain profile. 205 350 IPR000782 -
Lan4g0091 434 SUPERFAMILY FAS1 domain 40 190 IPR036378 -
Lan4g0091 434 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 432 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0091 Lan-Chr4 1285825 1288556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0091 - - ccaj:109812902 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0091 4 1285825 1288556 Lan19g0546 19 8906088 8907872 LSH