Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0084 ATGGAAAACAACACTGAATTGGAGGAAGGAGAGGCTTTCTCTGATAAGGATTATGATGAAGATAACATTTACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAACATGTTCTGGGCCATTTTCAAAAGGATTTTGAAGGTGGTGTTACTGCCGAGAATTTGGGTTCAAAATATGGTAGCTATGGTTCATTCTTACCTACCTACGAACGCTCTCGTGTTGAGTCTCACCCAAAGACTCCACAAAGAAACCACTGCTCACCAAATTCTCCTATCAATCTCCACAAGGAGGTTGCGTCTCATAGGTCCAAAGCATCTTCAACTGTGCCTTCTTCGAGGCTTGGAACTTGTTCCTATAGTTCACATTTAATTCATAATGTAAGAGCACCTTCAGTTGATGGTTCAGTGAAGAAGGAAGGAATGATTTCTTCCAGTGAAGTAGCTGACAGGTCCACTGTAAAAGATGATACTACAAAAAAATCAGGAAATTCAACTGACCGAAGAACATTGAAGCTTCGAATCAAAGTGAAACCTAATATCTTTGCACAAAAGAATGGAGCTATTTATAGTGGCCTTGGACTTGATAACTCTCCATCTTCCTCAATGGGGAACAGCCCTGTGGAAAGTGAAGGCATGCCAACTGTATCTAAAGAGAATGTTAATGATTCTCCGGCTGTAATTATTCAGGTTATGACTTCATTTCCTATCCCCACGGGTGTTCTAAAATCACCTCTACCTGAAAGCATGCTATACTTGATAAAAAAGGAAAACGTTATTGGAGACGGCAGATATATGTCTTCTGCTAATGTTTATCAAGAACCTAGTTCTATGTCTACTGGAGAATCTGATTCTCTTGTTGGGGATGGGCATTTGAAGAAGCAGAAAGTGAGAATAGGGAGACTTAGCGAAAAGCAGTTGGAATTGAAGCATATGAATGATATGACATTGCATTCAAATAAAAATTTAGGAAATATAACACCAGACTGTAAGGAAATTCTCTCTAATGATTTGAAATGTATGCCTCTGTCAAGTTTGATTTTTGATGCTGGTGGAACTACGAAAGTCACTGGAAAAGCTTCTAAAGTTTCCAAGGAGGTTAATAAGGGTCGCGTGGAAGGTAGAATGGTTTCTGTTGGAGCAGTGAAGCCAGATTCACTGGAGCCAATATCTGGTCAAGGTTTTGATAAAATTGAAAAGCAAAGAGCGGGAAATGGTTTTATGAAAAATATTTTAGAGCATGAGCTGGAAAATCCTTGCAAGGATAATTTTCCCGTCCCTAAGAATAATGATAAGTGTAATGTTACTTCTATGATTTCTGAAAACGTTGAGTGTGATGCTGTAAAATGTAAGGTAGACCAAGATCCTCAAAAACATGAGACCAACCAGAAGAAGAAGGCACTATCTGAGGGCAAGAATAAGTCAAAAGTTTGTCAGAGTCTTGGAAAAGCTGAGGCTGTTGCAAGAAAAGATAGCTTTGGGTGTATTAATAATCCAAAGGTAACTGATAAAGAGAGCGCTGGCATTGATGTTACTTCTGGTACAAGTAAAATGAATAAAACAAAGTCACTGAAGGATAATAAGGTCAGAGATAGTAACAGAGATTCATTGAAAGGGAAAAAATCAGAATCGAAAGTCAACGGTCCACCTGGTAACAGTGCAATAAAAAATACTAACATTGATAATTTTGTCAAACAGAGTGCATTTGGGGCTAAAACAACGAAAAGGCGTAATGTCAATAAAGTGAATGATCAGTTGCTCGCTGAGCCATGTACAAAAGATGCTTCAGGTTCATTTCCTGTTGTTGAAAATAAACATGCTCCTGAAATGATTACATCAGCTGTATCAGCACCTCAACTTATTGCAGAAAATTGGGTATGTTGTGATAGTTGCGAGAAATGGCGGCTTCTACCTACTGGAATAAAGCTTGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCAAAATTGGCTGCCTGGAATGAATTGGTGTGAAATCAGTGAGGAGGAGACAACAAATGCACTGTATGCGTCATATCAAATTCCAATTTCTGAGGGTAAGAATAACATCCAAAGTCATGCCGCGGGAATTGCAAGTGGAGTGAGTTCTGATGCTGTACAGATTGGCCCGAATCAGGAAAAGTCCAGTTCTGATGTATTGTCCGCACGAGGAAAGAAGAGACATGCTATTAAGGAAAAGACAATGCTAGGATTCAATAATCGCATGATCAATGCTCGAGAATCTGGAAAAATTTTAAGCTTGACTGACATGAATCAGCATCCTGAAGACTCAAGCCCGATGGAGCAGATGACTTCTAGACATTTTAGCACATGTAACAAATTGAAAGAAGAAAGGCATGTGGCTAGAGAGATGCAAAAACAAATAAATGGAGGTGACAAAAAGCTTATTAAATTGAAACGTAAGATGGATGCTGATCAATACAGATCAGGAACTCCTATGAAATCAAAAACTGAGGATGTTTGCTATGCTGAGAAGCAGTTAAAGCCTAGCATGGGCCTTTATAAGGTCGGCCTAAAATCAAGAAATGGTCAGCCAGCAAAGGCTAGTGGGGTGGATATGCAGAAGTATGATAACTATTGTTTACCTGAGGATGTAGAGGACAACTTATTAGACCCTGTAAAGAAAGTTGGAGATCAGTCTCAGTCAGATGTCGAGTCCTTTGATGTAAAACATGGTAGTAAAAATGATATTTCAGTGAAGAAAAGGAAATTTAAGGACTGGGTAGATAATGAGAAGCATGATGATTCATTCTCCTTGGAGGATGATAAGCAGTGTGGCAAAGAGGGCAATGCAAGTGGGTTTAGGAAGGAAAAGAAGTCTAGAATTTTGAGTACAGAGGCAAAATCAGTAATGGAAGTTGATGATAAGTCGAATAAAGGTGGGATGATGCATGTTTGCATGTCAGGCAGTAGAGACCAAATGAATGTTGGGACAAAAGTAAAATTTATCGATAAAGCTCAGAAGCCAAAGAAGCATAGAATAAATACCGAGTCCCATAAATCTTTAGATGGTATTGGTCAGTCGGGCAAGGATTTTGGCTCTGGACAAATTTCATTGGCACCAACTTCAAGCTCTTCTAAGGTTTTAGTGTCTCATATAGCAAAACCAAATCTTGAAGATGTGATAGGTTCACCTGTAGAGTCTGTTACCTCCTCATCTTTGAGGACCTCCAAATTGAATAAGCATATTCTGGCGGTAGGGGGCATTTCAGAAAGGGATGATGCTTCAAAAGGTGGTCTCTCTTCCATAGGTTCCAGGAGAAGTGCAGATAATACGGAGGGAATGCTATCAGTAAAATTGAAGGATAGAATTTCACATAACTTACATCTTGCATGCCACAAAGTTTCTTCAATAGAGTACGGGGTTGAAGATGTAAAAGACAAAGTGAGGGTCCGGGCTAAAACTTCTGAAATTAAGAATGACCATCTGTCTGAAGTTGGTGTGCCTGTTGTGCAACATGGCAGTTGTGCCAATGCTATGCATCATGAAGAGAAAGTACACAAGAACAACCAGGAAAGTGAACTTTCTTTGCAGAAATCTGGTAAGGTTACATCCTTGCACGGTAAGGAAAAGGACCGGAGGTCTGGTTCCAAGGTTGGTAAAGATAAGATGAAGCTTTCAGCTTTAGAGAATGGTTATTCCAAAAATGGTGGGAGGCATGGCTCAGCAGTTGATCCTAGTTATCACGCATATGTTCCTGAGACTAAAAATAATGCTAAATGCAGTTCTCCTAAGTCTAAACACGAGATTGATAATATTAGTCAGAAAAATGCTCTAAGACATGGGTCAAGTGAAGCTGGAAAGAAAACCAAAGTAAAACAAAAAGACTTGGAGAGTTCAGTTCTGAAAATGGATGCTCAAACTGATAGATCGAATATCCCTCAGCAGAACCTGATTCAGGGCTTTGAAGAAGAAAATGAAGCTAACCCAGAATCTAGAAATGGGAAATCCTTAGTTCTCACATCTTCGGTGAGTGAGGTTAAAAGTGAAACATTGTATGTGGGTTCTAGAACTGCACCTGGATTTCAAAAGGGAGGTAAGACTAATGAGCTTCCAGTCCATGTGTCTGGCAATGGTGATGTGGCCAAGACAATGAGAAAATCAGTTGATCTTAGTAGCAATGTTGGAGTTAATTATAACCCAGAAAAGGTTCCTGACCAACATCTCATTGTGTCAAGTCCCATGCAAACAAAGTCTAGCCAAACTGCCCGTAACATGCTGGAAGAAGCCACTAAACTAAAAAATAGAGCTGATCATTATAAGAACTCTGGGTTTGAGTTTGAGAGCAATGAGACATACTTTGATGCTGCATTGAAGTTTCTGCATGGAGCATCTCTTGTAGAAAATTGTCACAATGAGAGTAGCAAGCACAAGGATATGAATCCAACACAACTTTATGCCACTGCAGCTAATCTTTTCAAGTCCTGTGCCCATGAATATGAAAGGCACCAAGAAATGGCAGCTGCTGCTTTGTCTTATAAATGCATGGAGGTGGCTTACATGAGAGTTGTTTACTGTAAACATCCTAGCACAAATATGGATTGGCATGAGTTGCAAACAACTCTACAAATGGTTTCTCAAGGTGAATCTTCTTCATCTTCTGCATCCGATGTTGATAACTTAAACAATCAGACGGGAGTATATAAGGCTACCTTCCCCATGGCTACTAATAATCATGTTTCTGGTAACCAAGTCATATCTGCTCAAACTCGCCCGAATTTGGTCAGGCTTCTTGACTTTACTCAGGATATAAATTTTGCAATGGAGGCTTCTGGAAAATGCCAGAGCGCTTTTGCGGCTGCTAATGTGAACATGGAAGAGGCACGGAATAGAGACTGTATAAAATCTATTAGGAGGGTCATTGATTTCAGCTTCCAGGATGCAGACGAGCTTGTACATCTGGTTTTGATGGCAACAAATGCAATACGTCTTGCCGGTCTTGGCGGTGCTAGAGATTAA 4977 0.3984 MENNTELEEGEAFSDKDYDEDNIYLDSLSYIDERIQHVLGHFQKDFEGGVTAENLGSKYGSYGSFLPTYERSRVESHPKTPQRNHCSPNSPINLHKEVASHRSKASSTVPSSRLGTCSYSSHLIHNVRAPSVDGSVKKEGMISSSEVADRSTVKDDTTKKSGNSTDRRTLKLRIKVKPNIFAQKNGAIYSGLGLDNSPSSSMGNSPVESEGMPTVSKENVNDSPAVIIQVMTSFPIPTGVLKSPLPESMLYLIKKENVIGDGRYMSSANVYQEPSSMSTGESDSLVGDGHLKKQKVRIGRLSEKQLELKHMNDMTLHSNKNLGNITPDCKEILSNDLKCMPLSSLIFDAGGTTKVTGKASKVSKEVNKGRVEGRMVSVGAVKPDSLEPISGQGFDKIEKQRAGNGFMKNILEHELENPCKDNFPVPKNNDKCNVTSMISENVECDAVKCKVDQDPQKHETNQKKKALSEGKNKSKVCQSLGKAEAVARKDSFGCINNPKVTDKESAGIDVTSGTSKMNKTKSLKDNKVRDSNRDSLKGKKSESKVNGPPGNSAIKNTNIDNFVKQSAFGAKTTKRRNVNKVNDQLLAEPCTKDASGSFPVVENKHAPEMITSAVSAPQLIAENWVCCDSCEKWRLLPTGIKLEQLPEKWLCSMQNWLPGMNWCEISEEETTNALYASYQIPISEGKNNIQSHAAGIASGVSSDAVQIGPNQEKSSSDVLSARGKKRHAIKEKTMLGFNNRMINARESGKILSLTDMNQHPEDSSPMEQMTSRHFSTCNKLKEERHVAREMQKQINGGDKKLIKLKRKMDADQYRSGTPMKSKTEDVCYAEKQLKPSMGLYKVGLKSRNGQPAKASGVDMQKYDNYCLPEDVEDNLLDPVKKVGDQSQSDVESFDVKHGSKNDISVKKRKFKDWVDNEKHDDSFSLEDDKQCGKEGNASGFRKEKKSRILSTEAKSVMEVDDKSNKGGMMHVCMSGSRDQMNVGTKVKFIDKAQKPKKHRINTESHKSLDGIGQSGKDFGSGQISLAPTSSSSKVLVSHIAKPNLEDVIGSPVESVTSSSLRTSKLNKHILAVGGISERDDASKGGLSSIGSRRSADNTEGMLSVKLKDRISHNLHLACHKVSSIEYGVEDVKDKVRVRAKTSEIKNDHLSEVGVPVVQHGSCANAMHHEEKVHKNNQESELSLQKSGKVTSLHGKEKDRRSGSKVGKDKMKLSALENGYSKNGGRHGSAVDPSYHAYVPETKNNAKCSSPKSKHEIDNISQKNALRHGSSEAGKKTKVKQKDLESSVLKMDAQTDRSNIPQQNLIQGFEEENEANPESRNGKSLVLTSSVSEVKSETLYVGSRTAPGFQKGGKTNELPVHVSGNGDVAKTMRKSVDLSSNVGVNYNPEKVPDQHLIVSSPMQTKSSQTARNMLEEATKLKNRADHYKNSGFEFESNETYFDAALKFLHGASLVENCHNESSKHKDMNPTQLYATAANLFKSCAHEYERHQEMAAAALSYKCMEVAYMRVVYCKHPSTNMDWHELQTTLQMVSQGESSSSSASDVDNLNNQTGVYKATFPMATNNHVSGNQVISAQTRPNLVRLLDFTQDINFAMEASGKCQSAFAAANVNMEEARNRDCIKSIRRVIDFSFQDADELVHLVLMATNAIRLAGLGGARD* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0084 1658 MobiDBLite consensus disorder prediction 1190 1211 - -
Lan4g0084 1658 Gene3D - 618 674 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 1247 1261 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 919 946 - -
Lan4g0084 1658 PANTHER CW-TYPE ZINC FINGER 1 1650 - -
Lan4g0084 1658 Coils Coil 1409 1429 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 455 474 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 1268 1283 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 149 166 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 1170 1211 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 135 166 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 706 725 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 520 541 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 73 93 - -
Lan4g0084 1658 Pfam CW-type Zinc Finger 623 669 IPR011124 GO:0008270
Lan4g0084 1658 MobiDBLite consensus disorder prediction 455 471 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 503 556 - -
Lan4g0084 1658 MobiDBLite consensus disorder prediction 197 216 - -
Lan4g0084 1658 ProSiteProfiles Zinc finger CW-type profile. 618 671 IPR011124 GO:0008270
Lan4g0084 1658 MobiDBLite consensus disorder prediction 1241 1283 - -
Lan4g0084 1658 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0084 Lan-Chr4 1142506 1151831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0084 - - lang:109330169 2296.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0084 4 1142506 1151831 Lan16g1180 16 19234220 19243503 LSH
Lan4g0084 4 1142506 1151831 Lan19g0555 19 9139920 9149096 LSH