Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1180 ATGGAAAACAACATTGAGTTGGAGGAAGGAGAGGCTTTCTCTTACGATGATGATGATGAAGACAATATTGACCTTGATTCTCTCTCTTACATTGATGAGAAGATTCAACATGTTCTGGGCCATTTTCAAAAGGACTTTGAAGGTTATGTATGTGCCAAGGATTTAGGTGCAAAATATGGTGACTATGGTTCCTTCTTACCTACCTATGAACGCTCTCGTGTTGAGTCTCACCCGAAGACTCCACAAAGAAATCACTGTACACCAAAATCTCTCATCAATCTCCACAAGGAGGTTGTGTCTCATAGCTTAAAAGCGCCTTCAAATGTGCCTCCTTCGAGGCTTGGAATTGCTTCCTATAGTTCACATCCAGTTCATAATGTAAGAGCACCTTCAGTTGATGATTCAGGGAAGAAGGAAGAAGTGATTTCTTCCAGTGAAGTATCTGAGAAGTCCACTGTGAAAGATGATACTAGAAAAAAGTCACGAAATTCTACTGACCAAAGAACATTGAAGTTTCGAATCAAAGTGAAATCTAGTATCTTTGCACAAAAGAATGCTGCTATTTACAGTGGCCTCGGACTTGATAACTCTCCATCTTCCTCAATGGGGAACAGCCCTGTGGAAAGTGAAGGCATGCCACCTGTATGTAAAGTGAATGCTAACAATTCTCCAACTGAAATTATTAAGGTTATGACTTCCTTTCCTATCCCCGGTGGTCTTCTAACATCACCTGTACCTGATAGTATGCTCCACTCGATAAGAAAGGAAAAAGTTAATAAGAATGGCGTGCCAGGCAGAATGGTTTCTGTTGGAGTAGTGAAGGAGGAGTCATATGTGTCAATATCTAGCCAAGGTTTTGAGAAGGTTGAAAAGCAAAAAGCAGGAAATGGTTTTATGAAAAAAGTTGTAGACCATAAGCTGGAAAATTCCCGCAAGGATAAACTTTCTGTTCATAATAATAATGATAAGTGTAATAATACTTTCGTGCTTTCTGATAAGGTTGAGTGTGATGCTGTAAAGTATAATGTAGACCAAAATCCTCAAAAGCGTGAGACCAACCAAAAGAAAAAGGCTGTTTCTGAAGGCAAGAATAAGTCAAAAGTTTATCAGAGTCCTGAAAAAGGTGAGGCTATTGCAAGAGAAGATATATTTGGTGGTACTAATAATCCAATGGTAACTGCTAAAGAGAGTGCTGGATTTGATGTTACTTCTGGCAGAAGTAAAATGAATAAAGCGAAGTTATTGAAGGATACTAAGGTCAGAGATAGAGATTCGTTGAAAGGGACAAAATCAGAATTGAAAGTTGATGGTCCACCTGGTACCAGTGCAACAGAAAGTTCCAACATTGGTAATTTTGAAAAACAGAGGGCATTTGGGGCTAAAGTAAAGGGAAGACCAAATGTCAATAAAGTGGATGATCAGTTTCTTGCTGGGCCATGTACAAAAGATGCTTCAGGTTCATTTCCTGTTGAAGATAAGCCTGCTCCTGAAATGAATCCATTAGCCATAGCAGCACCTCAACTTATTGCAGAAGATTGGGTAGGTTGTGACAGTTGCGAGAAATGGCGGCTTCTACCTACTTGTATAAAGCCCGAGCAGCTTCCAGAGAAGTGGGTGTGTAGCATGCAAAATTGGCTGCCTGGAATGAATCGGTGTGACATCAGTGAGGAGGAGGCAACAAATGCATTTCATGCATTGTATCAAATTCCAATTTCTGAGTGTCAAAATAACATGCCAAGCCATGGCACTAGAACCAAAATTGGTGTGAGCTCTGTAGATGCTGTGCAATTTGGACGGAATCAACAAATGTCCAGTTTTGATGCATTGTCTGTTCGAGGAAAGAAGAAACATGCTATCATGGAAAAGACAATGACAGGAGTCAAGAATTACATTACCAATGACCAAGAATCTGGAAAGAATATAAGCTTGACTGACTTGAATCGGCATCCTGCAAACTCAAACCCGATGGAAAAGACGAGTTCTAGACGTTTTAGCATTTGTAACAACTTGATAGAAGAAAAACATGTGGCTAAAGAGATGCAAAAGCAAATAAATGGAGGTAACAGAAAGCTTATTAAATTGAAACGTAAGATGGACACTGATCAATATAGATCAGGAACACCTAAGAAATCAAAACCTGAGGATGTTTGCCATACTGAGAAGCAGTTGAAGCCTGGCATGTTCCTTGCGGATGCCGGTCTAAAATCAAGAAATGGTCTGCCAGAAAAGGCTAGTGGGATGGATATACGGAAGTATGATGACTTTTTCTTATCTGATGACATACAAGACAAGTTATTAGACCCTGTAAAGAAAGAAGGTAATCGGACTCAGTCAGATGGTGGGTCCTTCGGTGTAAAAAATGGTGGTAAAAGTGATGGTTCAGTGAAGAAAAGGAAATTGGAGGACTGGGTGGATACTGAGAAGCATAACAACTCATTCTCCTTGCAGGGTACTAAGCAGTGTGACAAAGAGGGCAATGCAAGTGGATTTAGGAAGGAAAAGAAGTCTAGAATTTTGAATATGGAGGTGAAATCAGCGACTGAAGGTGATAAGTTGAATAATGGTGGGATGATGCAAGTTTGCTTGTCAGGCAGTAGGGAACAAATGGCTGTTCGGACGAAAGTAAAATTTGTTGATAAAGGTCAACAGCCAAAGAAGCATAGAAAAAATACTGCATCCTGTCAAGCCTCGGATCATACTGTTCCATTTGGAAAGGATTTAGGCTCTGGACAACTTTCACTGGCAGCAACTTCCAGCTCTTCTAAGGTTTCAGGGTCTCATAGAGCTAAGACCAACTTTGAATACATGATAGGTTCACCTGTAGAATCGGTTACCTCCTCACCTCCGAGGACCTCCAAAATGAATAAGCATATTTTGGCAGTAGGGGACATTTCAGGGAAGCATGATGCTTCAAAAGGTGGTCTCTCTTCAATAGGGTCCAAGAAAATTGCAGATATTAGGGCGGGAAAGCTATCAGTAAAGTTGAAGGAGGATGGAATGTCACATAATTTTAGCCCCACGTGCTACAAAGTTTCTTCAATAGAGTACCAGGTTGAGGATGTAAAAGGCAAAGCAACGGTCCAAGCTAAAACTTCTGAACTTAAGAATGATCGTTTGCTTGAAGGTGGTGTCCTTCTTGAGCAACATCGCAATTGTGCCAATGGTATGCATCATGAGGTTGAAGTACACAAGAACAGCCAGGAGAGTGAACTTACTTGGCAGAAATCTTGTAAGGTTACATCCTTGCACCATAAGGAAAAGGAACGGAGGTCTGGTTCTTTGGTTGGTACAGATAAGATGAAGCTTTCGGCTTTAGAGAATGGTTATTCTAAAAATGGTGGGAGGCATGATTCAGCAGTTGATCCTAGTTATCATGCATCTGTTCCTGAGACTAGAAATGATGCTAAATGCAGTTCTCCTAAGTCTAAACAGATTGACAATATTTGTCAGAAAAATGCTCTAAGACATGGGTCAAGTGAATCTGGAAAGAAAAGCAAAGTAAAACAAAAAAACCGGGATAATCCACTTCTGAAAATGGATGCTCATTATAGTGCTGCTAGAAAGAATATCTCCCATCAGAACCTGATTCAGGACTTTGAAGAAGAAAACGAAGCTACTCATGTATACTCAGAATCTGGAGATGGAAAATCCAAAGTTATCACATCTTCAGCGGATGAGGTTAAAAGTGGAATGCTGTATGTGGGTTCTAGAACTGCACCTGGATTTGAAAAGGGAGGGACGGCTAATGAGCACCCAGTCCATGTGTCTGGCAATGGTGATGTGGCCTACACAATGAGAAAATCAGTTGATCTTAATAGCAAAATTCGAGTTAATTATAACTCCGAAAAGGTTCACGATCAACATCTCACTATGTCAAGCCCCGTGCAAACAAATTCTAGCCAAACTGCCTGTAAAATGCTGGAAGAAGCCACCAAACTAAAAGATAGAGCCACTCATTTTAAGAACTCTGGGTTTGAGTTTGAGAGCAATGAGACTTATTTTGATGCTGCTTTGAAGTTTCTTCATGGAGCATCTCTTGTAGAAAATAGTCACAATGAGAGTAACAAGCATAAGGAGAGGAATCAAATGCAACTTTATGCTACTGCAGCTAAACTTTTCAAATCCTGTGCCCATGAATATGAAAGATGCCAAGAAATGGCAGTGGCTACTTTGGCTTACAAATGCATGGAGGTGGCATACATGAGAGTTGTTTACTGTAAACATTCTAGTACAAACAGGGATCGGCATGAGTTGGAATCATCTCTACAAATGGTTTACCAAGGTGAATCTCCTTCTTCTTCTGCATCCGATGTTGATAACTTAAACAATCAGATGGCAGTGGATAAGGCTACTTTCCCAAGGGGTACTAATACTCATGTTTCTGGTAACCAAGTCTTATCTGCTCGAACTCGTCCGAATTTGGTCAGGCTTCTTGACTTTACTCAGGATATAAATTCTGCAATGGAGGCTTCTGCAAAATACCAGACCACTTTTGTGCTCGCTAATGTGAACATGGAAGATGCACGAAATAGAGACTGTATAACATCGATTAGGAGGGTTACTGATTTCAGCTTCCAGGACGTGGAAGAGCTTGTACGTCTAGTTTCAATTGCAACAAATACCATACGCTGTGCTGGTCTTGGCGGTCCTAGAGATTAG 4659 0.4059 MENNIELEEGEAFSYDDDDEDNIDLDSLSYIDEKIQHVLGHFQKDFEGYVCAKDLGAKYGDYGSFLPTYERSRVESHPKTPQRNHCTPKSLINLHKEVVSHSLKAPSNVPPSRLGIASYSSHPVHNVRAPSVDDSGKKEEVISSSEVSEKSTVKDDTRKKSRNSTDQRTLKFRIKVKSSIFAQKNAAIYSGLGLDNSPSSSMGNSPVESEGMPPVCKVNANNSPTEIIKVMTSFPIPGGLLTSPVPDSMLHSIRKEKVNKNGVPGRMVSVGVVKEESYVSISSQGFEKVEKQKAGNGFMKKVVDHKLENSRKDKLSVHNNNDKCNNTFVLSDKVECDAVKYNVDQNPQKRETNQKKKAVSEGKNKSKVYQSPEKGEAIAREDIFGGTNNPMVTAKESAGFDVTSGRSKMNKAKLLKDTKVRDRDSLKGTKSELKVDGPPGTSATESSNIGNFEKQRAFGAKVKGRPNVNKVDDQFLAGPCTKDASGSFPVEDKPAPEMNPLAIAAPQLIAEDWVGCDSCEKWRLLPTCIKPEQLPEKWVCSMQNWLPGMNRCDISEEEATNAFHALYQIPISECQNNMPSHGTRTKIGVSSVDAVQFGRNQQMSSFDALSVRGKKKHAIMEKTMTGVKNYITNDQESGKNISLTDLNRHPANSNPMEKTSSRRFSICNNLIEEKHVAKEMQKQINGGNRKLIKLKRKMDTDQYRSGTPKKSKPEDVCHTEKQLKPGMFLADAGLKSRNGLPEKASGMDIRKYDDFFLSDDIQDKLLDPVKKEGNRTQSDGGSFGVKNGGKSDGSVKKRKLEDWVDTEKHNNSFSLQGTKQCDKEGNASGFRKEKKSRILNMEVKSATEGDKLNNGGMMQVCLSGSREQMAVRTKVKFVDKGQQPKKHRKNTASCQASDHTVPFGKDLGSGQLSLAATSSSSKVSGSHRAKTNFEYMIGSPVESVTSSPPRTSKMNKHILAVGDISGKHDASKGGLSSIGSKKIADIRAGKLSVKLKEDGMSHNFSPTCYKVSSIEYQVEDVKGKATVQAKTSELKNDRLLEGGVLLEQHRNCANGMHHEVEVHKNSQESELTWQKSCKVTSLHHKEKERRSGSLVGTDKMKLSALENGYSKNGGRHDSAVDPSYHASVPETRNDAKCSSPKSKQIDNICQKNALRHGSSESGKKSKVKQKNRDNPLLKMDAHYSAARKNISHQNLIQDFEEENEATHVYSESGDGKSKVITSSADEVKSGMLYVGSRTAPGFEKGGTANEHPVHVSGNGDVAYTMRKSVDLNSKIRVNYNSEKVHDQHLTMSSPVQTNSSQTACKMLEEATKLKDRATHFKNSGFEFESNETYFDAALKFLHGASLVENSHNESNKHKERNQMQLYATAAKLFKSCAHEYERCQEMAVATLAYKCMEVAYMRVVYCKHSSTNRDRHELESSLQMVYQGESPSSSASDVDNLNNQMAVDKATFPRGTNTHVSGNQVLSARTRPNLVRLLDFTQDINSAMEASAKYQTTFVLANVNMEDARNRDCITSIRRVTDFSFQDVEELVRLVSIATNTIRCAGLGGPRD* 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1180 1552 Pfam CW-type Zinc Finger 513 558 IPR011124 GO:0008270
Lan16g1180 1552 MobiDBLite consensus disorder prediction 131 166 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 416 431 - -
Lan16g1180 1552 Coils Coil 677 697 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 349 374 - -
Lan16g1180 1552 PANTHER CW-TYPE ZINC FINGER 257 1546 - -
Lan16g1180 1552 PANTHER CW-TYPE ZINC FINGER 1 259 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 640 661 - -
Lan16g1180 1552 ProSiteProfiles Zinc finger CW-type profile. 507 560 IPR011124 GO:0008270
Lan16g1180 1552 MobiDBLite consensus disorder prediction 1079 1176 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 698 717 - -
Lan16g1180 1552 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 259 - -
Lan16g1180 1552 PANTHER CW-TYPE ZINC-FINGER PROTEIN 257 1546 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 1079 1095 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 878 899 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 1157 1176 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 104 166 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 1132 1156 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 416 450 - -
Lan16g1180 1552 Gene3D - 509 562 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 768 798 - -
Lan16g1180 1552 MobiDBLite consensus disorder prediction 345 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1180 Lan-Chr16 19234220 19243503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1180 - - lang:109330169 2559.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0084 4 1142506 1151831 Lan16g1180 16 19234220 19243503 LSH
Lan16g1180 16 19234220 19243503 Lan19g0555 19 9139920 9149096 LSH