Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1711 ATGTCTAAAGTTCTCGCCTTTTCTAGAGGTGCTGATTTTTGCCCTGGTGGTTCAATATTCGCCGATGACGAGGACGCAAGCTTCTTCCTTCCTCGTGGCCATCAAGTGGATGTTTACTTCCCTACTCGGAAGAGATCACGCATCAACGCTCCATTTGTTTTCAGTGGAGAATTGTTTGATCAGAAGCATAAAACTTCTTTTGAATCTTTGCCAGATGAATGCCTCTTCGAGATCTTTAGAAGGTTGCCTGAAGGTGAAGATAGGAGTGCTTGTGCTTGTGTTTCCAAGCGTTGTCTAACACTTCTAAGCAACATTTGTAAGAATGAAATCTGCAGCAACATAAAAAATATCAGACCGGAGAACGGGTTCAGTGAAAAGGGTCACGAATTCGGAGGTGAGGGATACCTCTCGAGAAGCTTGGAAGGGAAGAAGGCAACTGATGTTAGACTTGCAGCCATTTCTGTTGGGACTGCATCTCGTGGAGGATTGGGGAAGCTTTCTATCCGTGGAAGCAATTCAGATCGTGGTGTGACTAATCTAGGACTTAAAGCAGTTGCTCATGGATGTCCTTCTCTAAAGACTCTTTCTATATGGAATGTTGCTACCATCGGTGATGGAGGCCTAATTGAGATTGCTAGTGGATGTCAACAACTAGAGAAGCTCGACCTTTGCAAGTGCCCCACAATTTCCGACAAGGCTTTGATTGCAGTTGCAAAGAACTGCCCAAACCTGGCCGAGTTATTGTTGGAATCATGTCCAAACATTGGTAATGAAGGTCTAGAAGCTATTGGCAAGTGCTGCTCCAATCTAAGGTCTATATCTATCAAGGACTGCACCAGTGTCAGTGATCAAGGAATTGCTAGCTTGTTTTCTTCGGCTTCTTTGTCTCTGACAAAGGTGAAGCTCCAGGCACTGACTGTTTCCGATCTCTCTCTGGCTGTTATTGGACACTATGGCAAGGCAGTTACAGATCTCGTCCTTAATTTCCTCCCAAATGTCAGTGAGAGGGGTTTCTGGGTTATGGGTAACGGTAATGGATTGCAGAAACTAAAGTCACTTACAGTTGCCTCATGCCAAGGTGCAACAGATATTGGGCTTGAAGCTGTAGGAAAGGGTTGTCCAAATATGAAAAGTGCCCACCTTCGTAAGTGTGTGTTTCTCTCGGACAACGGGCTGGTGTCATTCACCAAGGCTGCTGTAACATTAGAGAGCCTACAGTTGGAAGAGTGCCACAGTGTTACCCAAAACGGGTTTTTTGGTGTCCTTTTCAACTGTGGTGCAAATTTGAAGGCTATATCACTCGTAAGCTGCTTTGGGATCAAAGATATGAACTTGTCGTTGTCATCAATATCTCCATGTGAATCACTTAGATCATTATCAATCTGTAACTGCCCTAGTTTTGGCAACACTACCCTATATGTACTTGGAAAGTTGTGCCCCCAGCTTCAGTATATTGAGCTGACCGGACTTGAGGGACTGACAGATGACGGATTTCTTCCGCTGCTCAAGAGCTCTAAGGCTGGTCTGGTTAAAGTTAATCTCAGTGGTTGCGTAAATCTGACAGACAAATTAGTTTTATGCTTGGCCAATCTGCATGGTTGGACTCTTGAGACTTTGAACCTCGACGGTTGTAAGAATATCACTGATTCTAGCTTGATGGCCATTTCCGAAAATTGTCCATTTCTCTGTGATCTGGATGTTTCTAAATGTGCTATCACTGATTCTGGAATTGCAGTCCTGGCTGATGCAGAACAGTTCAATCTGCAGGTTCTTTCTATATCAGGCTGCACTTTGGTTTCTGATTGGAGCTTGCCCGCATTGAGAAAATTAGGTCACACTCTCTTAGGACTAAACATCCAGCATTGCAATGCAATCAGCAGCAGCACAATTGACATGCTTTTGGAACTTCTTTGGAGGTGTAAGATCCTCTCCTGA 1935 0.4434 MSKVLAFSRGADFCPGGSIFADDEDASFFLPRGHQVDVYFPTRKRSRINAPFVFSGELFDQKHKTSFESLPDECLFEIFRRLPEGEDRSACACVSKRCLTLLSNICKNEICSNIKNIRPENGFSEKGHEFGGEGYLSRSLEGKKATDVRLAAISVGTASRGGLGKLSIRGSNSDRGVTNLGLKAVAHGCPSLKTLSIWNVATIGDGGLIEIASGCQQLEKLDLCKCPTISDKALIAVAKNCPNLAELLLESCPNIGNEGLEAIGKCCSNLRSISIKDCTSVSDQGIASLFSSASLSLTKVKLQALTVSDLSLAVIGHYGKAVTDLVLNFLPNVSERGFWVMGNGNGLQKLKSLTVASCQGATDIGLEAVGKGCPNMKSAHLRKCVFLSDNGLVSFTKAAVTLESLQLEECHSVTQNGFFGVLFNCGANLKAISLVSCFGIKDMNLSLSSISPCESLRSLSICNCPSFGNTTLYVLGKLCPQLQYIELTGLEGLTDDGFLPLLKSSKAGLVKVNLSGCVNLTDKLVLCLANLHGWTLETLNLDGCKNITDSSLMAISENCPFLCDLDVSKCAITDSGIAVLADAEQFNLQVLSISGCTLVSDWSLPALRKLGHTLLGLNIQHCNAISSSTIDMLLELLWRCKILS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1711 644 SUPERFAMILY F-box domain 58 104 IPR036047 GO:0005515
Lan3g1711 644 SUPERFAMILY RNI-like 314 641 - -
Lan3g1711 644 SUPERFAMILY RNI-like 184 296 - -
Lan3g1711 644 Gene3D Ribonuclease Inhibitor 444 644 IPR032675 -
Lan3g1711 644 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 635 - -
Lan3g1711 644 Gene3D Ribonuclease Inhibitor 137 240 IPR032675 -
Lan3g1711 644 Pfam Leucine Rich repeat 240 263 IPR001611 GO:0005515
Lan3g1711 644 Pfam Leucine Rich repeat 535 556 IPR001611 GO:0005515
Lan3g1711 644 Pfam Leucine Rich repeat 559 581 IPR001611 GO:0005515
Lan3g1711 644 SMART LRR_CC_2 399 424 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 189 214 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 479 504 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 533 558 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 559 583 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 215 240 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 347 372 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 373 398 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 453 478 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 241 266 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 585 610 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 506 531 IPR006553 -
Lan3g1711 644 SMART LRR_CC_2 267 292 IPR006553 -
Lan3g1711 644 PANTHER UNCHARACTERIZED 16 635 - -
Lan3g1711 644 Gene3D Ribonuclease Inhibitor 241 442 IPR032675 -
Lan3g1711 644 SMART fbox_2 70 111 IPR001810 GO:0005515
Lan3g1711 644 Gene3D - 63 102 - -
Lan3g1711 644 Pfam F-box domain 67 106 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1711 Lan-Chr3 29655246 29658735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1711 K14515 - gmx:100819226 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1711 3 29655246 29658735 Lan14g0808 14 14921725 14925109 PCT
Lan3g1711 3 29655246 29658735 Lan3g1075 3 23075749 23079031 PCT
Lan14g0808 14 14921725 14925109 Lan3g1711 3 29655246 29658735 PCT
Lan3g1075 3 23075749 23079031 Lan3g1711 3 29655246 29658735 PCT