Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1075 ATGTCTAAAGTTATCGGCTTTACTGGTGATGATTTTTACCATGGGGGATCACTATATCCTAACCCCAAGGAAGCGAGTCTGTTCTTGTCTGTTGGCCATCAAGCCGGGTTTTACTACCCTCTTCCAAAGAGGTCTCGTGTCAGTGTTCCATTCGATTTCAGTGGAGAGTGGTTTGTGCAGAAGCCAAAGACAACCATTGAATCTTTGCCAGATGAATGTCTCTTCGAGATCCTGAGAAGGTTGCCAGTTGGCCAAGATAGGAGTCAATGCGCTTCAGTATCCAAGCGCTGGCTTATGCTTCTGAGCAATATATCTAAGAATGAAATTTGCATCAACGAAAGTGCCAAAAATGAAAAGGAGGGTGATGATGAGGGATATGGCGATGAAGGATACCTGTCACGAACCTTGGAAGGGAAGAAGGCAACTGATGTTAGACTCGCTTCCATTGCTGTTAATACTGCATGTAGAGGAGGATTGGGAAAGCTTTCGATTCGTGGAAACAACAAATCAGAATGTCGGGTGACTGATCTTGGTCTAAAGGCAATTGGTTGTGGATGCCCTTCTCTAAAGTCCCTTTCTCTATGGAATCTTGCTAGCATTGGTGATGCAGGTCTGATTGATATCGCTGCTGGCTGTCAACAGTTAGAGAGGCTTGACCTCATCAACTGCCCAGCAATTTCTGACAAGGCTTTAGTCACAGTTGCGATGAAGTGCCCAAATCTGGCCGAGTTATCAATAGAATCATGTCCTAACATTGGTAATGAAGGTCTGCAAGCTATTGGGAAGTTGTGCCACAACCTCAGGTCTATATCAATCAATGGTTGCTCTGGAGTTGGTGATCAGGGAATTGGTGGCCTTTTGTCTGCAACTTCTTCAGTTCTGACAAAGGTGCATCTTGAGTCGTTGATGGTTTCCGATGTCTCTCTAGCAGTCATTGGGCATTATGGCATTTCAGTTACTGATCTTGTCCTTAATTGCCTCCCAAATGTCACCGAGAGGGGATTCTGGACTATGAGTAATGGTCGTGCACTGCAGAAACTAAAGTCACTCACAATTGGATCTTGCCGAGGAGTGACTGATGTTGGGCTTGAAGCTATTGGAAAGGGTTGTCCAAATGTTAGATACTTCCAGCTTCGCAAGTGTCCATTTCTTTCGGACAATGGGTTGGTATCATTTGCCAAGGCTGCTTCGTCAATTGAGAACCTGCAATTGGAAGAGTGCCACAGGGTTACCCAATTTGGGTTTTTTGGTCTCCTTTTTACCTGTGGTGCAAAATTGAAGGTTCTTACCCTGGCGAGCTGCTACGGGATCAAAGATATGAACTTGAAATTGCCCGAAGTGTTTCCTTGTGTATCCCTCGTTTCATTGTCAATCTGTAACTGCCCTGGGTTTGGTAATGCTATCCTTGCTGTATTGGGAAAGCTGTGTCCTCAGCTTCAGAATGTTGAATTGAATGGACTTGAGGAAATAACAGATGCAGGGCTTCTTCCACTGCTTGAGAGCTCCAAGGCTGGTCTGGTTAAAGTTAATCTCCGTGGCTGCAAAAATGTTACCGACAAGGTAGTTTCATCCATTGCCAATTTGCATGGTTCGACTCTTGATGTGCTAAATCTTGATGGTTGCAATAAAATCGGTGATGCTAGCTTGAAGGCAATTGCCTCCAACTGTCATGTGCTCTCTGATCTCGATGTTTCAAGGTGTGCAATCACTGACGCTGGGATTGCAGCCCTTGCACGCGGGAATCTGCATAACCTGAAAATACTTTCTCTGGCATGTTGTGCATTGGTTTCAAACAAGAGTGTGCCTGCTTTGAAAAAAATGGGTCGTACCTTCGCTGGATTGAACATCCTTGCTTGCAATAGAATCAGCAGCAGTGCAGTTATCAAACTTATGGAACATCTCCGGACCTGTGATATCCTCTCCTAA 1926 0.4496 MSKVIGFTGDDFYHGGSLYPNPKEASLFLSVGHQAGFYYPLPKRSRVSVPFDFSGEWFVQKPKTTIESLPDECLFEILRRLPVGQDRSQCASVSKRWLMLLSNISKNEICINESAKNEKEGDDEGYGDEGYLSRTLEGKKATDVRLASIAVNTACRGGLGKLSIRGNNKSECRVTDLGLKAIGCGCPSLKSLSLWNLASIGDAGLIDIAAGCQQLERLDLINCPAISDKALVTVAMKCPNLAELSIESCPNIGNEGLQAIGKLCHNLRSISINGCSGVGDQGIGGLLSATSSVLTKVHLESLMVSDVSLAVIGHYGISVTDLVLNCLPNVTERGFWTMSNGRALQKLKSLTIGSCRGVTDVGLEAIGKGCPNVRYFQLRKCPFLSDNGLVSFAKAASSIENLQLEECHRVTQFGFFGLLFTCGAKLKVLTLASCYGIKDMNLKLPEVFPCVSLVSLSICNCPGFGNAILAVLGKLCPQLQNVELNGLEEITDAGLLPLLESSKAGLVKVNLRGCKNVTDKVVSSIANLHGSTLDVLNLDGCNKIGDASLKAIASNCHVLSDLDVSRCAITDAGIAALARGNLHNLKILSLACCALVSNKSVPALKKMGRTFAGLNILACNRISSSAVIKLMEHLRTCDILS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1075 641 SMART LRR_CC_2 556 580 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 238 263 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 370 395 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 530 555 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 264 289 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 396 421 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 450 475 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 476 501 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 503 528 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 186 211 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 212 237 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 582 607 IPR006553 -
Lan3g1075 641 SMART LRR_CC_2 344 369 IPR006553 -
Lan3g1075 641 Gene3D - 60 106 - -
Lan3g1075 641 SUPERFAMILY F-box domain 62 102 IPR036047 GO:0005515
Lan3g1075 641 PANTHER UNCHARACTERIZED 15 631 - -
Lan3g1075 641 Pfam F-box-like 66 100 IPR001810 GO:0005515
Lan3g1075 641 Gene3D Ribonuclease Inhibitor 131 237 IPR032675 -
Lan3g1075 641 Gene3D Ribonuclease Inhibitor 503 640 IPR032675 -
Lan3g1075 641 SUPERFAMILY RNI-like 170 637 - -
Lan3g1075 641 Gene3D Ribonuclease Inhibitor 238 443 IPR032675 -
Lan3g1075 641 Pfam Leucine Rich repeat 532 553 IPR001611 GO:0005515
Lan3g1075 641 Pfam Leucine Rich repeat 556 578 IPR001611 GO:0005515
Lan3g1075 641 Pfam Leucine Rich repeat 237 260 IPR001611 GO:0005515
Lan3g1075 641 Pfam Leucine Rich repeat 345 366 IPR001611 GO:0005515
Lan3g1075 641 Gene3D Ribonuclease Inhibitor 444 502 IPR032675 -
Lan3g1075 641 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 15 631 - -
Lan3g1075 641 SMART fbox_2 69 110 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1075 Lan-Chr3 23075749 23079031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1075 K14515 - gmx:100805418 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1075 3 23075749 23079031 Lan3g1075 3 23075749 23079031 ECH
Lan14g0808 14 14921725 14925109 Lan3g1075 3 23075749 23079031 LSH
Lan3g1711 3 29655246 29658735 Lan3g1075 3 23075749 23079031 PCT
Lan3g1075 3 23075749 23079031 Lan3g1711 3 29655246 29658735 PCT