Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1612 ATGGCTAATAACGCGGCTGCGTGTGCTGAGAGAGCAACTAGTGACATGCTCATTGGTCCTGACTGGGCAACTAACATTGAGTTGTGTGACATTATTAATATGGACCCAAGGCAAGCAAAAGATGCATTAAAAATACTTAAGAAGCGTTTGGGAAGTAAAAATCCCAAAATACAACTTCTGGCTCTTTTTGCACTGGAGACCCTTAGTAAAAATTGTGGTGAAAGTGTATTTCAGCTGATAGTTGAGCGGGATATCTTGCATGATATGGTTAAGATAGTGAAGAAAAAGCCGGAGTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACGTGGCAAGAAGCTCTTGGGGGCCCAACTGGAGTTTATCCCCAGTATTATGCAGCATATAATGAATTAAAGAGTTCTGGAGTTGATTTTCCGCCACGAAATGAGAATAGTGTGCCATTCTTCACTCCTCCTCAAACCCAGCCAGTTGTTCATTCCGATGCAGAATATGGTGATGTTGCTATTCAGGCTTCTCTTCAGTCAGATGCATCTGGCCTTAGTTTCGAAGAGATTCAAACTGCTCAAGGAATAGCTGATGTTTTGATGGAAATGATTAGTGCCTTGAATCCCAAAGACCCTGAGGGTGTGAAGGATGAAGTGATTGTTGACCTTGTTGACCAGTGCCGATCTTACCAAAAACGTGTCATGGTTCTTGTGAACAATACTGCGGATGAGCAGCTTTTAGGTCAGGGATTAGCATTGAATGACAGCTTTCAGCGAGTACTCTGTCGGCATGATGATATTGCAAAAGGAACTGCTGATACAGGTGCAAGAGGAACAGAAACTTCAGTTCTGCCTCTTGTAAATATAAACCATGAGGATGATGAGTCAGAAGAAGATTTTGCTCAACTAGCCCATAGGTCATCAAGAGATACTCATGCACAGGACCAGAAACCAGCCTATGACAAGGCAGAACCGTTGAGGGTAAACCCACTTCTTCCTCCACCACCAGCATCAAAGAAGCCAGTCTACTCTGACACCAGCATGGTTGATTATCTCAGTGGTGATACATACAACAAAGCAGAAGAGCCCTTTGAAAACTCATTTGCACCCCCTGTTCATGCTCCTGTCTCATCAACAATACCGACAGTGTCCTCATCCCCTCCTCATGCAGTAAATACCTCATCACCATTTTTAGGGAAACAGCCTGTGTATGATGAGCCATCTCCGGTGAAAAAAACTTCAGAAGAACTGCCGCCGGCACCCTGGGACACACAATCTACTGCCATCATTCCACCCCCACCTTCAAAGCATAATCAAAGACAGCAGTTTTTTGAACAACAAGGTGGGTCTCCTTCAAATGGTGGATCTAGTGCCTCATATGACAGTTTGGTGGGACAAACTCAGAATCTGTCTCTGAATTCATCCACCCCAACCAAACAACAGAAGCCAGCTGAAGATGCCCTTTTCAAAGATCTAGTTGATTTCGCAAAATCCAAAACTTCTTCGAACCCCAATAGATCATATTGA 1518 0.4348 MANNAAACAERATSDMLIGPDWATNIELCDIINMDPRQAKDALKILKKRLGSKNPKIQLLALFALETLSKNCGESVFQLIVERDILHDMVKIVKKKPELNVREKILILIDTWQEALGGPTGVYPQYYAAYNELKSSGVDFPPRNENSVPFFTPPQTQPVVHSDAEYGDVAIQASLQSDASGLSFEEIQTAQGIADVLMEMISALNPKDPEGVKDEVIVDLVDQCRSYQKRVMVLVNNTADEQLLGQGLALNDSFQRVLCRHDDIAKGTADTGARGTETSVLPLVNINHEDDESEEDFAQLAHRSSRDTHAQDQKPAYDKAEPLRVNPLLPPPPASKKPVYSDTSMVDYLSGDTYNKAEEPFENSFAPPVHAPVSSTIPTVSSSPPHAVNTSSPFLGKQPVYDEPSPVKKTSEELPPAPWDTQSTAIIPPPPSKHNQRQQFFEQQGGSPSNGGSSASYDSLVGQTQNLSLNSSTPTKQQKPAEDALFKDLVDFAKSKTSSNPNRSY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1612 505 MobiDBLite consensus disorder prediction 426 479 - -
Lan3g1612 505 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Lan3g1612 505 CDD VHS 10 135 - -
Lan3g1612 505 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Lan3g1612 505 PIRSF TOM1 1 504 IPR014645 -
Lan3g1612 505 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Lan3g1612 505 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Lan3g1612 505 PANTHER TOM1-LIKE PROTEIN 4 1 502 - -
Lan3g1612 505 Pfam VHS domain 9 133 IPR002014 GO:0035091|GO:0043130
Lan3g1612 505 MobiDBLite consensus disorder prediction 300 319 - -
Lan3g1612 505 PANTHER TOM1-LIKE PROTEIN 1 502 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lan3g1612 505 MobiDBLite consensus disorder prediction 372 484 - -
Lan3g1612 505 MobiDBLite consensus disorder prediction 300 341 - -
Lan3g1612 505 Gene3D - 2 158 IPR008942 -
Lan3g1612 505 MobiDBLite consensus disorder prediction 374 396 - -
Lan3g1612 505 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Lan3g1612 505 Gene3D - 174 273 IPR038425 -
Lan3g1612 505 SUPERFAMILY GAT-like domain 145 267 - -
Lan3g1612 505 CDD GAT_GGA_like_plant 186 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1612 Lan-Chr3 27834205 27842543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1612 - - gmx:100792343 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0746 15 16502167 16508051 Lan3g1612 3 27834205 27842543 LSH