Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0746 ATGGCTAATAATGCGTCCGCGTGTGCTGAGAGAGCAACTAGTGACATGCTCATTGGTCCTGACTGGGCAATTAACATTGAGTTGTGTGACATAATTAATATTGACCCTAGGCAAGCAAAAGATGCATTAAAGATACTTAAGAAGCGTTTGGGTAGTAAAAATCCCAAATTACAACTTCTGGCTCTTTTTGTACTGGAGACCATTAGTAAGAATTGTGGTGAAAGTGTATTTCAGCAGATCGTTGAGCGGGATGTCTTACATGATATGGTTAAGATAGTGAAGAAGAAGCCGGACTTAAATGTGAGGGAAAAAATACTGATTCTAATTGATACATGGCAAGAAGCTTTTGGAGGGCCAACCGGAGTTTATCCCCAATACTATGCAGCATATAATGAATTAAGGTCTTATGGAGTTGATTTTCCGCCACGAGATGAGAATAGTGTGCCATTCTTCACTCCTCCTCAAACCCAGCCAGTTGTTCATTCCACTACAGAATATGATGATGTTGCTATTCAGGCTTCTCTTCAGTCAGATGCATCTGGCCTTAGTTTCGAAGAGATTCAAACTGCTCAAGGAATAGCTGACGTGTTGACGGAAATGCTTAGTGCCTTAAATCCCAAAAACCCTGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCACTCTTACCAAGAGCGTGTCATGGTTCTAGTGAACAATACTGCGGATGAGAAACTTTTAGGTCAGGGATTAGAGCTGAATGACAGCCTTCAGAGAGTACTCCGTCGACATGATGATATTGCGAATGGCACTGCTGATGCTGGTGCAAGAGGAATCGAAACTTCAGTTCTGCCACTTGTAAATGTAAACCATGAGGATGATGAGTCAGAAGATAATTTTGCTCAACTAGCCCATAGGTCATCACGGGATACTCATCCACAGAATCGGAAACCAGCCTATGATAAGGCAGAACCATTGAGGGTAAACCCAGTTCTTCCCCCACCACCAGCATCAAAGAAGCCAGTCAACTCTGACACCAGCATGGTTGATTATCTCAGTGGTGATACATACAAAGCAGAAGAACCCTTTGAGAACTCATTTGCACCTCCTGTTCATGGTAGCCCTAATCCTACCTCGTCAAACATTCCAACAGCATCTTCCTCACCCGCTCCTCATGCGGTGAGTACCTCGTCACCGATTTTAAGCAGAAAGCCTGTGTATGATGAGCCATCTCCCATGAAAAAAACTTCAGAAGAACTGCCACCGGCTCCCTGGGAGACACAATCTACTGGCATCATTCCACCCCCACCTTCAAAGCATAACCAGAGACAGCAGTTTTTTGAGCAACAAGGTGGGCCTCTTTCAAGTGGTGGATCCAGTTCCTCCCATGACAGCTTGTTGGGACAAACTCAGAATCTGTCTCTGAATTCATCCACCCCAACTAAACAACAGAAGCCTGCAGAAGATGCCCTTTTCAAAGATCTAGTTGATTTTGCAAAATCCAAAACTTCATCTTCGAATCCCAAAAATAGGTCATATTGA 1533 0.4397 MANNASACAERATSDMLIGPDWAINIELCDIINIDPRQAKDALKILKKRLGSKNPKLQLLALFVLETISKNCGESVFQQIVERDVLHDMVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELRSYGVDFPPRDENSVPFFTPPQTQPVVHSTTEYDDVAIQASLQSDASGLSFEEIQTAQGIADVLTEMLSALNPKNPEGVKEEVIVDLVDQCHSYQERVMVLVNNTADEKLLGQGLELNDSLQRVLRRHDDIANGTADAGARGIETSVLPLVNVNHEDDESEDNFAQLAHRSSRDTHPQNRKPAYDKAEPLRVNPVLPPPPASKKPVNSDTSMVDYLSGDTYKAEEPFENSFAPPVHGSPNPTSSNIPTASSSPAPHAVSTSSPILSRKPVYDEPSPMKKTSEELPPAPWETQSTGIIPPPPSKHNQRQQFFEQQGGPLSSGGSSSSHDSLLGQTQNLSLNSSTPTKQQKPAEDALFKDLVDFAKSKTSSSNPKNRSY* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0746 510 Pfam GAT domain 192 266 IPR004152 GO:0035091|GO:0043130
Lan15g0746 510 SUPERFAMILY ENTH/VHS domain 3 142 IPR008942 -
Lan15g0746 510 MobiDBLite consensus disorder prediction 359 487 - -
Lan15g0746 510 PANTHER TOM1-LIKE PROTEIN 1 509 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lan15g0746 510 MobiDBLite consensus disorder prediction 429 482 - -
Lan15g0746 510 PANTHER TOM1-LIKE PROTEIN 4 1 509 - -
Lan15g0746 510 CDD VHS 10 135 - -
Lan15g0746 510 Pfam VHS domain 8 116 IPR002014 GO:0035091|GO:0043130
Lan15g0746 510 SUPERFAMILY GAT-like domain 145 267 - -
Lan15g0746 510 Gene3D - 174 272 IPR038425 -
Lan15g0746 510 MobiDBLite consensus disorder prediction 301 346 - -
Lan15g0746 510 MobiDBLite consensus disorder prediction 368 399 - -
Lan15g0746 510 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Lan15g0746 510 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Lan15g0746 510 Gene3D - 2 151 IPR008942 -
Lan15g0746 510 PIRSF TOM1 1 509 IPR014645 -
Lan15g0746 510 MobiDBLite consensus disorder prediction 301 320 - -
Lan15g0746 510 CDD GAT_GGA_like_plant 186 264 - -
Lan15g0746 510 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0746 Lan-Chr15 16502167 16508051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0746 - - gmx:100792343 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0746 15 16502167 16508051 Lan3g1612 3 27834205 27842543 LSH