Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1599 ATGAAAATTCAAACCTCATCGATCCTTTTTTTATTAGCCGTTTTCACTACGGTGTCGCTCGCCGATAAGTTAACTTCCGCCACCTTCGACGGCGCCATATACTCCGATCAAACACGCACAACAACGGAAACGGGCACGGGTTGTGAGGTGTGGAGCAAGCAATGCTCCGAAGCGGTGCTGAGCATGGCGCGGCGGCGGGAGGTGGTGGAGTGGATAAGAAAGATAAGAAGAAGGATTCATGAGAATCCGGAGCTAGCATTTGAGGAAATTGAAACGAGTGGTTTGATAAGGAAAGAGTTGGATATGATGAAAATTAGTTATAGGTATCCGGTAGCGAAGACTGGTATTCGTGCTTGGATCGGAACTGGTGGTCCTCCTTTTGTTGCCATTAGAGCTGACATGGATGCGCTTCCTATCCAGGAAGCTGTAGAATTGGAGTACAAGTCTAAAATTGCCGGTAAAATGCACGCTTGTGGGCACGACGCACATGTGGCTATGCTTATGGGTGCTGCGAAGATATTGAAAACTAGAGAGCATTTGTTAAAGGGAACTGTTATTCTGCTATTCCAACCAGGGGAGGAAGCTGGTAATGGTGCAAGGAAAATGATACAAGATGGTGCTTTGGAAAACGTGGAGGCTATATTTGGAGTTCATGTATTCCATCACCTTGATACTTCTATAATTGGTTCAAGGCCTGGATCCTTTCTTGCAGGTTGTGGAATTTTCAGAGCAGTAATTAGTGGCAAAAAGGGCACTGCTGCAAATCCACACCACTCTACAAATCCTGTTTTGGCTGCTTCAGCTGCAATAATTAGCTTACAGGGTATTGTTTCCCGAGAATCAGATCCCTTGGATTCACAGGTTGTTTCTGTGACTTTGTTCAATGGTGCAGACAATCATGACATAATACCAGACACAGTGGTCATTGGTGGAACTTTCAGAGCTTTCTCTAACACTACCTTTTACTATCTACTTGAAAGAATAAAGCAGGTGATTGTGGAACAGTCTAGTGTATTTAGATGTTCAGCAGAAGTTAACTTCTTTGAAAATGAAAACAGCATTTATCCTCCAACAATCAATGATGAAAAGATGTATGAACATCTAAAAAAGGTGTCAATTGATTTATTGGGCCAAAACAATTTCATGGTAGTACCACCTGTGATGGGTTCTGAAGATTTCTCATTCTACTCACAAGTGATTCCATCAACTTTCTATTTCATAGGAATAAGGAATGAAACACTTGGGTCTACTATTACAGGACACTCTCCACATTTCATGATTGATGAAGATGCTCTACCAATAGGTGCAGCTACTCAAGCTACCATTGCAGAAAGGTACCTTATTGAACACGGCAAATGA 1359 0.4253 MKIQTSSILFLLAVFTTVSLADKLTSATFDGAIYSDQTRTTTETGTGCEVWSKQCSEAVLSMARRREVVEWIRKIRRRIHENPELAFEEIETSGLIRKELDMMKISYRYPVAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVELEYKSKIAGKMHACGHDAHVAMLMGAAKILKTREHLLKGTVILLFQPGEEAGNGARKMIQDGALENVEAIFGVHVFHHLDTSIIGSRPGSFLAGCGIFRAVISGKKGTAANPHHSTNPVLAASAAIISLQGIVSRESDPLDSQVVSVTLFNGADNHDIIPDTVVIGGTFRAFSNTTFYYLLERIKQVIVEQSSVFRCSAEVNFFENENSIYPPTINDEKMYEHLKKVSIDLLGQNNFMVVPPVMGSEDFSFYSQVIPSTFYFIGIRNETLGSTITGHSPHFMIDEDALPIGAATQATIAERYLIEHGK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1599 452 SUPERFAMILY Bacterial exopeptidase dimerisation domain 238 347 IPR036264 -
Lan3g1599 452 Gene3D Zn peptidases 74 432 - -
Lan3g1599 452 SUPERFAMILY Zn-dependent exopeptidases 65 449 - -
Lan3g1599 452 TIGRFAM amidohydrolases: amidohydrolase 73 435 IPR017439 GO:0016787
Lan3g1599 452 PIRSF Amidohydrol_AmhX 59 451 IPR017439 GO:0016787
Lan3g1599 452 CDD M20_IAA_Hyd 72 447 IPR044757 GO:0009850|GO:0016787
Lan3g1599 452 Pfam Peptidase family M20/M25/M40 129 443 IPR002933 GO:0016787
Lan3g1599 452 PANTHER PEPTIDASE M20 FAMILY MEMBER 40 450 IPR017439 GO:0016787
Lan3g1599 452 Gene3D - 237 355 - -
Lan3g1599 452 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 40 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1599 Lan-Chr3 27624937 27638450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1599 K21604 - gmx:100785666 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0787 15 17016331 17022665 Lan3g1599 3 27624937 27638450 LSH