Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0787 ATGAAAATTCACACATCGGCGATTCTTTTTTCATTCACCGTTCTCATGACGGTTTCACTAGCGGATCAGTTAACTTCCACCACCTACCACGGCGCTTTACTCACCAACCACACATGCTACAGTCAACACAACAAACATGTCCTATCTCCACCCCTCTTCATCTGCAAAAACAAAACACAGCGATCAAAATCATCAGAATCGGAGTGCGATGTGTGGAGCAAGGCGTGTTCGGAGGTGGTGATGAGCGTGGCACGGCGGCCGGAGATAGCAGAGTGGTTGAAAAAGGTGAGGAGGAAGATCCATGAGAATCCAGAGCTAGCTTTTGAGGAAATTGAGACGAGTAGGTTGATAAGAAAAGAGTTGGATCTGATGGAAGTTAGTTATCGATATCCGTTGGCGAAGACTGGTATTCGTGCCTGGATCGGAACTGGTGGTCCACCTTTTGTAGCCATTAGAGCTGATATGGATGCACTTCCTATTCAGGAAGCTGTGAAATGGGAGTACAAGTCAAAAGTTGCCGGTAAAATGCACGCTTGTGGGCACGACGCACATGTGGCTATGCTTATCGGCGCTGCCAAGATCTTGAAAACTAGAGAGCATTTGTTAAAGGGAACTGTTATTCTGCTATTCCAGCCAGCAGAGGAAGCTGGTAATGGTGCAAAGAGAATGATACAAGATGGTGCATTGGAGGATGTGGAAGCTATATTTGCAGTTCATGTATCCCATCAATATGCAACTTCTATAGTTGGTTCAAGGCCTGGACCCTTGTTAGCTGGCTGTGGATTCTTCAGAGCAGTAATTAGTGGGAAAAAGGGCACTGCTACTAATCCATACCATTCTGTTGATCCAATTTTGGCTGCTTCAGCTGCAATAATAAGCTTACAGGGTATTGTTTCCCGTGAATCAAACCCCTTGGATTCACAGGTTGTTTCTGTGACTTCATTCAATGGCGGGGACAATCTTGACATGACACCAGACACAGTGGTCCTTGGTGGAACTTTCAGAGCTTTCTCTAACACCAGCTTTTACCGTTTACTTGAAAGAATAGAGCAGGTGATTGTGGAACAGGCCAGTGTCTTCAGATGCTCTGCAGAAGTTGACTTCTTTGAAAAGGAATACACCATTTATCCTCCTACAGTCAATGATGACCGGATGTATGAACATGTGAAGAAGGTGTCCATTGATTTGTTGGGCGAAAATAGTTTCAAGGTAGTACCACCTATGATGGGTGCTGAAGATTTCTCATTTTACTCCCAGGTGATTCCCTCAGCTTTCTACTACATAGGAATAAGGAATGAAACACTCGGGTCTATCCATACGGGACACTCTCCATATTTCATGATCGATGAAGATGTTCTACCGATAGGCGCTGCTGTTCATGCTACCATTGCAGAAAGGTATCTCATTGAACATGGCTGA 1419 0.4489 MKIHTSAILFSFTVLMTVSLADQLTSTTYHGALLTNHTCYSQHNKHVLSPPLFICKNKTQRSKSSESECDVWSKACSEVVMSVARRPEIAEWLKKVRRKIHENPELAFEEIETSRLIRKELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVKWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQYATSIVGSRPGPLLAGCGFFRAVISGKKGTATNPYHSVDPILAASAAIISLQGIVSRESNPLDSQVVSVTSFNGGDNLDMTPDTVVLGGTFRAFSNTSFYRLLERIEQVIVEQASVFRCSAEVDFFEKEYTIYPPTVNDDRMYEHVKKVSIDLLGENSFKVVPPMMGAEDFSFYSQVIPSAFYYIGIRNETLGSIHTGHSPYFMIDEDVLPIGAAVHATIAERYLIEHG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0787 472 CDD M20_IAA_Hyd 93 468 IPR044757 GO:0009850|GO:0016787
Lan15g0787 472 Gene3D Zn peptidases 95 461 - -
Lan15g0787 472 SUPERFAMILY Zn-dependent exopeptidases 87 470 - -
Lan15g0787 472 PIRSF Amidohydrol_AmhX 81 471 IPR017439 GO:0016787
Lan15g0787 472 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 14 471 - -
Lan15g0787 472 SUPERFAMILY Bacterial exopeptidase dimerisation domain 259 368 IPR036264 -
Lan15g0787 472 PANTHER PEPTIDASE M20 FAMILY MEMBER 14 471 IPR017439 GO:0016787
Lan15g0787 472 TIGRFAM amidohydrolases: amidohydrolase 95 456 IPR017439 GO:0016787
Lan15g0787 472 Pfam Peptidase family M20/M25/M40 150 465 IPR002933 GO:0016787
Lan15g0787 472 Gene3D - 258 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0787 Lan-Chr15 17016331 17022665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0787 K21604 K14664 gmx:100785666 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0787 15 17016331 17022665 Lan3g1599 3 27624937 27638450 LSH