Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1549 ATGACCAACACAGTTGCAGATTTGTCTCAGGGAAATGGTGGTGCTTCTCTTCCCCCTCCTAACTCTCAGCCTGGGCCACCAGAACATCAGGTTTCTCATGTTGGCAGTGGCAATACGATTTTCAAGAGTGGGCCACTTTTCATATCTTCCAAAGGAATCGGATGGACATCGTGGAAGAAAAGGTGGTTTATTCTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAGTGCTATCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTGGTCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGCTCATGATGGAAGAGCTTTCACACTTAAGGCTGAAACTACGGAGGATTTATATGAGTGGAAGACTGCACTCGAGAATGCTCTGGCAAAAGCACCCAGTGCTGCCAATGCGACAGAGCAAAATGTGAAGGATAGAGAACCAATGAAATCTACAGTCATCGGCCGACCAATTTTACTTGCTCTGGAGGACGTTGATGGAACTCCATCGTTCTTGGAGAAAGCCCTGCAGTTCTTAGAACAGCATGGATCCAACGTAGAAGGGATTTTGAGACAAGCAGCTGATGTTGATGATGTTGAACGTCGGGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGACGAGGATGCACATGTTATCGGTGATTGTGTTAAGCATGTACTTCGGCTATTGCCATCTTCTCCGGTCCCTGCTTCTTGTTGCAATGCACTGTTGGAAGCTGTCCGAACTGAGCGAGGTAGTAGGGTTTCTGCCATGCGTACAGCAATAAATGACACTTTCCCTGAGCCAAATCGCCGCTTATTGCAAAGAATACTCTTGATGATGCAAGTTATTGCTTCCCGTAAAGCTTTAAATAGAATGAGCTCCTCAGCTGTAGCAGCTTGCATGGCACCATTACTTCTTCGCCCCCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGATGTCGGTGGTGATGGTTCAGTACAACTTTTACAAGCAGCTGCAGCAGCAAACCATGCTCAAGCAATTTGTATAACTTTACTAGAAGAATATAACAGCATATTCGGGGAGGGTTCTGAATCCCCTGATATATACACCGACACAGAAGAGAGTGGATCTGAGAGCGAGGGGGCTACAGATGATGATTTGTCCTATGATGATGATGAGGATTATGACGATGAAGAAGATGGATCAGTACACGAGTCTGATTTAGAAGATGATATTGTTAGTGAATCCTATAGCGAGACTGGAGAGTCTCAGGCCAATGATGATAAGGACCATGATGGTTCTGGTCCAAGTTCAAAATCCTCGGGTGCGAGTGAAGAATTTAAAGTCATTCAACCATCAAAATCACTTAAAGGCTCACGATCTCAGCATCAAGATATCAAAAGCATTGAAAATCTCACAAATCTAACTAAGAATGCTTGTGCAGATCAGTCCAATGAGCCTGCTGATATTGTTGGAGGTGTTTCCACTGACCATGTTACAATGGATAATTCAGATTTTACTAGCCCTCCTTCACATATAAAAAAATCTATGACCATGTCCAACGGTGGTGCTCCAAGTCCAACACCTCGGCGCCGCACCATGTTGGGGCGTACTTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGACGACGAAGATGAAATTGAAAGGCTTGAAGTAACTAGGACAGAATTACAAACTCAAATTGCACAGGAGGTGGAGGCAAATGTAAAGCTGCAAACTCATATTGATAGAAGAAAGAAAGAGTTGCAAGAACGCCGTCTGGCTCTTGAACAAGATGTGGCTAGGCTACAAGAACAGTTGCACAAGGAGAAGAAGTCTCAGACCAAATCAGACCTTGAGGAATTAGCTTTGGTAGAAGTAGATCTCACTGATTTGGAGCGTAAGGTTGAAGAACTCGGGATCCGTCTCAATGCACAACTTGAGCATAATTCTGGATCTACTTTGGATTCCTATAATCAATCGGAACAGATATCAAATGATGAAAGAAAATGGAAAAGTAAGCCAGATACTGACCGGAAAAATAAGCCACATACTGAAGTTGCTGCCACATCACAATCTGACAGGTCAATAAGTAAGGACACTAATCTTGGTGGAGCAGAAAATGATAGTGAGAGAAAGTCAGAGTCAATACCATTTTCAAACAAACAGCCACCAACTAGTTCCAAGAAATCTGGTTCAAAGGGTGAGGGAGCAAATTCCACTCCTTCTGCATTGACAAAACTGACATCCAGGCTGAACTTTTTGAAGGTGCGCCAAAGTTCGGATAAGGGCCGCGACCGAGATTCAAATTACTCTGTACAAAACCTGGAAAAAGGAAAAGGACCTGAAACCCAGTATGTGTCAAACCCAGAAAAGGGCAGAGGCTTAGAGAGTTCCCACTCAGGCAAATGTAAATCATCAAATCAAACTTCAGAGAAATTGAGGAAATCAGATAGCCAGCCAGGCTACCACTCAGAAGGGTGGAATCCAAATCAATATCCGAAACAATTGGAAAGAGGAAGATCAGAAGGCCATCATCAACCTTATAATGTCGATAAAGGACGATGA 2631 0.4318 MTNTVADLSQGNGGASLPPPNSQPGPPEHQVSHVGSGNTIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPSAIPQKGNEVNLTLGGIDLNNSGSVVVKADKKLLTVQFPDAHDGRAFTLKAETTEDLYEWKTALENALAKAPSAANATEQNVKDREPMKSTVIGRPILLALEDVDGTPSFLEKALQFLEQHGSNVEGILRQAADVDDVERRVREYEQGKVEFSPDEDAHVIGDCVKHVLRLLPSSPVPASCCNALLEAVRTERGSRVSAMRTAINDTFPEPNRRLLQRILLMMQVIASRKALNRMSSSAVAACMAPLLLRPLLAGDCEIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYNSIFGEGSESPDIYTDTEESGSESEGATDDDLSYDDDEDYDDEEDGSVHESDLEDDIVSESYSETGESQANDDKDHDGSGPSSKSSGASEEFKVIQPSKSLKGSRSQHQDIKSIENLTNLTKNACADQSNEPADIVGGVSTDHVTMDNSDFTSPPSHIKKSMTMSNGGAPSPTPRRRTMLGRTSARKNLSMESIDFPIDDEDEIERLEVTRTELQTQIAQEVEANVKLQTHIDRRKKELQERRLALEQDVARLQEQLHKEKKSQTKSDLEELALVEVDLTDLERKVEELGIRLNAQLEHNSGSTLDSYNQSEQISNDERKWKSKPDTDRKNKPHTEVAATSQSDRSISKDTNLGGAENDSERKSESIPFSNKQPPTSSKKSGSKGEGANSTPSALTKLTSRLNFLKVRQSSDKGRDRDSNYSVQNLEKGKGPETQYVSNPEKGRGLESSHSGKCKSSNQTSEKLRKSDSQPGYHSEGWNPNQYPKQLERGRSEGHHQPYNVDKGR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1549 876 MobiDBLite consensus disorder prediction 513 543 - -
Lan3g1549 876 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 7 781 - -
Lan3g1549 876 Coils Coil 643 670 - -
Lan3g1549 876 CDD RhoGAP 185 323 - -
Lan3g1549 876 Gene3D - 29 147 IPR011993 -
Lan3g1549 876 Pfam PH domain 42 145 IPR001849 -
Lan3g1549 876 MobiDBLite consensus disorder prediction 383 432 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 1 18 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 812 829 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 684 706 - -
Lan3g1549 876 Coils Coil 575 595 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 779 794 - -
Lan3g1549 876 ProSiteProfiles PH domain profile. 39 146 IPR001849 -
Lan3g1549 876 SUPERFAMILY PH domain-like 10 146 - -
Lan3g1549 876 SMART RhoGAP_3 182 372 IPR000198 GO:0007165
Lan3g1549 876 MobiDBLite consensus disorder prediction 1 35 - -
Lan3g1549 876 Pfam RhoGAP domain 185 328 IPR000198 GO:0007165
Lan3g1549 876 MobiDBLite consensus disorder prediction 842 857 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 481 499 - -
Lan3g1549 876 Coils Coil 607 634 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 669 876 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 669 683 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 738 778 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 452 475 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 707 725 - -
Lan3g1549 876 SUPERFAMILY GTPase activation domain, GAP 184 377 IPR008936 GO:0007165
Lan3g1549 876 CDD PH 42 141 - -
Lan3g1549 876 ProSiteProfiles Rho GTPase-activating proteins domain profile. 176 375 IPR000198 GO:0007165
Lan3g1549 876 Gene3D Rho GTPase activation protein 152 376 IPR008936 GO:0007165
Lan3g1549 876 MobiDBLite consensus disorder prediction 859 876 - -
Lan3g1549 876 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 7 781 - -
Lan3g1549 876 MobiDBLite consensus disorder prediction 378 568 - -
Lan3g1549 876 SMART PH_update 40 148 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1549 Lan-Chr3 26974328 26989294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1549 - - gmx:100817373 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0889 15 18168970 18180874 Lan3g1549 3 26974328 26989294 LSH