Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0889 ATGACCAATACTAATGCAGAATTGTCTCAGGGAAATAGTGGTGCTTCTCTTCCCCCATCTAACCCTCAGCCTGGGCCACCAGAACATCAGCGTTCTCAAGTTGGCAGTGGCAATACGATTTTCAAGAGTGGGCCACTATTCATATCTTCCAAAGGAATCGGATGGACATCTTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAGTGCTATCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGACAAGAAGCTTTTGACCGTACAATTTCCTGATGCTCATGATGGGCGAGCTTTCACACTAAAGGCTGAAACTACAGAGGACTTATATGAGTGGAAGACTGCACTCGAGAATGCTCTGGCAAAAGCACCTAGTGCTGCTAATGCGACAGAGCAAAATGGTATCTTCAGGAACGAACAGATTGATTCAATTGATATTTCTATGGACCAGTTGAAGGATAGAGAACCAATGAAATCTACAGTCATTGGCCGTCCAATTTTACTTGCTCTGGAGGATGTTGATGGAACTCCGTCATTCTTGGAGAAAGCCCTGCAGTTCTTAGAACAGCATGGAGCCAATGTAGAAGGGATTTTGAGACAAGCAGCTGATGTTGATGATGTTGAACGGCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGATGAGGATGCACATGTTATCGGCGATTGTATTAAGCATGTACTTCGGCTATTGCCTTCTTCTCCAGTCCCTGCATCTTGTTGCAAGGCACTGTTAGAAGCTGTCCGAACTGAACGAGGTAGTCGGGTTTCTGCTATGCGTACAGCAATAAATGACACTTTCCCTGAACCAAATCGTCACTTATTGCAAAGAATACTCTTGATGATGCAAACTATTGCTTCCCGTAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTAGCAGCTTGCATGGCACCGTTACTTCTTCGCCCCCTTCTAGCTGGAGATTGTGATATTGAAAATGATTTTGATGTAGGAGGCGATGGTTCAATACAACTTTTACAAGCAGCTGCTGCAGCAAACCATGCTCAAGCAATTTGCATAACTTTATTAGAAGAATATAACAGCATATTTGGGGAAGGTTCTGAATCCCCTGATATATACACCGATACAGAAGAGAGTGGATCTGAAAGCGAGGAGGGTACAGAAGATGATTTGTCCTATGATGATGAGGATTATGATGATGAAGAAGATGGATCAGTACATGAGTCTGATGTAGATGATGATCTTGTTAGTGAATCCTATAGCGAAACTGGAGAGTCTCAGGCCTATGATGAGCATGATGATAAGGACCATGATCATTCTAGCCCAAGTTCAAGATCCTCGGGCGCGAGTGAAGAATTTAGAGTCACTCGACCATCAAAGTCATTTCGAGGCTCACAACCTCAGCATCAAAATATCAAAAGCAGTAAAAATCTGACGAGTCCAACTAAGAATGCTTGTACAGATCAGTCCAATGAGCCTGCTGATATTGTTGGAGGTGTTTCCACTGACCAATCTACAGAGGATAATTCAGATTTTCCTAGCCCTTCTTTATGTATCAAAAAATCTATAACCATGTCCAATGGTGGTGCTCCAAGTCCAACACCTCGGCGCCGCACCATGTTGGGGCGTACTTCTGCACGAAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGACGATGAAGATGAAATTGAAAGGCTCGAAACAGCTAGGACAGAATTACAAACCCAAATTGCACAGGAGGTGGAGGCAAACGTAAAGCTGCAATCTCATATCGATAAGAGAAAGAAAGACTTGCAAGAGCGCCGTCTGGCTCTTGAGCAAGATGTGGCAAGGCTGCAGGAACAGTTGCGCAAGGAAAAGAAGTCTCGGACTAAGTCACACCTTGACGAATTAGCTTTGGTAGAAGTAGATCTTACTGACTTGGAGCGCAAGGTTGAAGAACTTGGGACGCGGCTCAATGCACAACTTGAGCAGAATTCTGGATCTACCTTGGATTCCTATAATCAATCGGAACAGATATCAAGTGATGAAAGAAAATGGAAAAATAAGGCAGATACTGAAGTTTCTGCCACATCACAATCTGACAGGTCAATAAGTAAGGGCACTAATCTTGGTGGAGCAGAAAATGAAAATGAGAGGAAGTCAGAGTCGATACCATTTTCAAACAAACAGCCACCGACTAGTTCCAAAAAATCCGGTTCAAAGGGTGAGGGAGCAAATTCCACTCCTTCTGCATTGACAAAACTGACATCGAGACTGAACTTTTTGAAGGTGCGCCAAAGTTCGGATAAAGGACGTGATCGAGATTCAATTTCACACAACCTGGAAAAAGGAAAAGGATCTGAAACTCAATATGCGGCAAACCAAGAAAAGGGTAGAGGCTTAGACAGCTCTCATTCGAGCAAAGAAAAATCACATCAAAGTTCGGAGAAATTGAGAAAATCAGATAGTCAGCCAGGCTACCATTCAGAAGGATGGAATCCAAATCAACATCCAACACACTTGGAAAGAGGAAGATCAGAAGGCCATCATCAGTCTTATAATGTCGATAAAGGACGATGA 2655 0.4301 MTNTNAELSQGNSGASLPPSNPQPGPPEHQRSQVGSGNTIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPSAIPQKGNEVNLTLGGIDLNNSGSVVVKADKKLLTVQFPDAHDGRAFTLKAETTEDLYEWKTALENALAKAPSAANATEQNGIFRNEQIDSIDISMDQLKDREPMKSTVIGRPILLALEDVDGTPSFLEKALQFLEQHGANVEGILRQAADVDDVERRVREYEQGKVEFSPDEDAHVIGDCIKHVLRLLPSSPVPASCCKALLEAVRTERGSRVSAMRTAINDTFPEPNRHLLQRILLMMQTIASRKAVNRMSSSAVAACMAPLLLRPLLAGDCDIENDFDVGGDGSIQLLQAAAAANHAQAICITLLEEYNSIFGEGSESPDIYTDTEESGSESEEGTEDDLSYDDEDYDDEEDGSVHESDVDDDLVSESYSETGESQAYDEHDDKDHDHSSPSSRSSGASEEFRVTRPSKSFRGSQPQHQNIKSSKNLTSPTKNACTDQSNEPADIVGGVSTDQSTEDNSDFPSPSLCIKKSITMSNGGAPSPTPRRRTMLGRTSARKNLSMESIDFPIDDEDEIERLETARTELQTQIAQEVEANVKLQSHIDKRKKDLQERRLALEQDVARLQEQLRKEKKSRTKSHLDELALVEVDLTDLERKVEELGTRLNAQLEQNSGSTLDSYNQSEQISSDERKWKNKADTEVSATSQSDRSISKGTNLGGAENENERKSESIPFSNKQPPTSSKKSGSKGEGANSTPSALTKLTSRLNFLKVRQSSDKGRDRDSISHNLEKGKGSETQYAANQEKGRGLDSSHSSKEKSHQSSEKLRKSDSQPGYHSEGWNPNQHPTHLERGRSEGHHQSYNVDKGR* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0889 884 MobiDBLite consensus disorder prediction 865 884 - -
Lan15g0889 884 ProSiteProfiles Rho GTPase-activating proteins domain profile. 193 392 IPR000198 GO:0007165
Lan15g0889 884 MobiDBLite consensus disorder prediction 826 849 - -
Lan15g0889 884 SMART RhoGAP_3 199 389 IPR000198 GO:0007165
Lan15g0889 884 MobiDBLite consensus disorder prediction 1 18 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 400 448 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 394 586 - -
Lan15g0889 884 Coils Coil 662 689 - -
Lan15g0889 884 Coils Coil 594 614 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 749 789 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 1 36 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 454 471 - -
Lan15g0889 884 Gene3D Rho GTPase activation protein 170 393 IPR008936 GO:0007165
Lan15g0889 884 MobiDBLite consensus disorder prediction 690 884 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 717 737 - -
Lan15g0889 884 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 3 792 - -
Lan15g0889 884 SUPERFAMILY PH domain-like 11 146 - -
Lan15g0889 884 Pfam PH domain 42 145 IPR001849 -
Lan15g0889 884 ProSiteProfiles PH domain profile. 39 146 IPR001849 -
Lan15g0889 884 MobiDBLite consensus disorder prediction 790 807 - -
Lan15g0889 884 Pfam RhoGAP domain 202 345 IPR000198 GO:0007165
Lan15g0889 884 CDD RhoGAP 202 340 - -
Lan15g0889 884 Gene3D - 28 147 IPR011993 -
Lan15g0889 884 CDD PH 42 141 - -
Lan15g0889 884 SUPERFAMILY GTPase activation domain, GAP 201 394 IPR008936 GO:0007165
Lan15g0889 884 MobiDBLite consensus disorder prediction 808 825 - -
Lan15g0889 884 MobiDBLite consensus disorder prediction 472 562 - -
Lan15g0889 884 Coils Coil 626 653 - -
Lan15g0889 884 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 3 792 - -
Lan15g0889 884 SMART PH_update 40 148 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0889 Lan-Chr15 18168970 18180874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0889 - - gsj:114415231 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0889 15 18168970 18180874 Lan3g1549 3 26974328 26989294 LSH