Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1510 ATGGCATCTATTAGAAGAGCATTGTCTCCGGTTCCTCAAGCTCGAACTGTATCGAATTTAGAAATTTGTTCAGTAGCTTCTCCCTTGTCTAAGTCCTCCTCAAACACTCAGAGCTGTCCACAATCCACTGGATTGTTATCTTCTTCGGTCAGTTTATCGGATTCTCGCGCTTTTGTTTTGGGTGTGTTCTCCCCAAGGTCTTTGAGGGTTCTTGAGAGGTCAATCTCAAAGCAAAAGGTCCAGCTTTGGAGGAAGGTGCTTTTCCATTTTTCCATTTGTTTCATGGTTGGTGTTTCTATTGGAATCATTCCACTTGCATCAACGAACTTCTCTACAAATCTATTGCCTATGCATCAAGCTTTCTCTATTGAGATGATCTCTGCAGTTGGAAATTTTAAGGCGTTAGAAAACGTGAAGATAAATTCGATGCCATCAATTGATGAGGCAGTGAAGTTTAATGCTACTTCAAATTCGGCAGCGAAAGAACAAACACTATTAGATGAGGTAGCTTATGATATCTCCAATAGCAAATTACTCAGTGAAGAGCCATATTTGGAGTCTCAAAAGCTTCTTATCATCGTGACACCGACATACAATCATCCATTTCAAGCATATTACTTGAATCGCCTCGCACAGACTTTAAAGTTGGTTCCACCTCCTTTGTTGTGGATTGTTGTTGAGATAAATTCCCAATCTGAAGAAACCATTGACATCTTGAGGAGTAGTGGAATTGTGTACAGGCATCTCATTTGTAAAACTAATCTAACCGATACGAGCTATAGGAGCATTGTTCAAAGAAATCTTGCACTAGCTCACATCGAAACTCATCAACTCGATGGAATTGTTTACTTTGCAGATGATGATAACATATACTCACTGGAGGTCTTTCAGGAAATGAGAGAAATCAGGCGATTTGGAACATGGACTATAGCAAGGCTTTCAGGGGATAAAAGTGCCATTGTCTTGCAAGGGCCCATTTGTAATGGAAATCGAGTAATTGGATGGCACATAAATGAACCAAATGACATATCTAAAAGATTTCATGCTGAAATGTCAGGTTTTGCCTTCAATAGTACAATACTCTGGGATCCAAAGAGGTGGCGCCGACCTAATCTTGAACCTATCAGGCAGCTTGACTCAGTAAAGGAAGCGTTCTGGATTAGCACGTTGATTCAGCAAGTTGTTGAAGATGAAAGCCAAATGGAGGGCTTAATGAACAACTGCACGAAAATTATGGTTTGGCATATTGATCTCAAATCATCTTATTCGTTCTATCCTCAGAACTGGATTATAAAGAACAACTTAGATGTCATTCTTCACATTCCATTTGAGTGA 1335 0.3978 MASIRRALSPVPQARTVSNLEICSVASPLSKSSSNTQSCPQSTGLLSSSVSLSDSRAFVLGVFSPRSLRVLERSISKQKVQLWRKVLFHFSICFMVGVSIGIIPLASTNFSTNLLPMHQAFSIEMISAVGNFKALENVKINSMPSIDEAVKFNATSNSAAKEQTLLDEVAYDISNSKLLSEEPYLESQKLLIIVTPTYNHPFQAYYLNRLAQTLKLVPPPLLWIVVEINSQSEETIDILRSSGIVYRHLICKTNLTDTSYRSIVQRNLALAHIETHQLDGIVYFADDDNIYSLEVFQEMREIRRFGTWTIARLSGDKSAIVLQGPICNGNRVIGWHINEPNDISKRFHAEMSGFAFNSTILWDPKRWRRPNLEPIRQLDSVKEAFWISTLIQQVVEDESQMEGLMNNCTKIMVWHIDLKSSYSFYPQNWIIKNNLDVILHIPFE* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1510 444 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 437 IPR029044 -
Lan3g1510 444 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 438 IPR005027 GO:0015018|GO:0016020
Lan3g1510 444 CDD GlcAT-I 189 415 IPR005027 GO:0015018|GO:0016020
Lan3g1510 444 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 438 - -
Lan3g1510 444 Pfam Glycosyltransferase family 43 210 418 IPR005027 GO:0015018|GO:0016020
Lan3g1510 444 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 433 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1510 Lan-Chr3 26593872 26598201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1510 1 439 Glycosyltransferase AT1G27600 43.636 9.81e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1510 K20869 - gmx:100808765 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1510 3 26593872 26598201 Lan3g1510 3 26593872 26598201 ECH
Lan15g0919 15 18494765 18497732 Lan3g1510 3 26593872 26598201 LSH
Lan14g0714 14 14136871 14139894 Lan3g1510 3 26593872 26598201 LSH