Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0919 ATGGCTTCATTTCGTAGGACTCTGTCACCGGCGTATCACGATCGCCACCACCACAACGGCGTCGTTTCAGTTTCTTCCCCTTCTCACAAATTCTCCCCAAACAGCAACAATTACTCCAAATTGACCTCTCCGTTACACGCGCTGCTCGCGCGCGTAGCCGGCGCGTTCGCTAAACGATACGGCCGGAAAGGCCAGTGGAGAAAAACTCTCTTTCGTTGCTTGCTATTTTTCTTCGTCGGTTTCTTACTAGGCATGTTCCCGTTCGGCCACGTGGCAGTTAACGACGACATAGAGATCAATACACCACGCGCCACCACAACTTCCAACAAAGCTCAATTGCCTAGGGACGATGAAACCGGTTTCACAATTGATCCAGTGAGATTGACTGCAGAGAATCACATCTCCGAGGCAGTTACTAATTTCAGATTCGATTTCGCACCGAGAAAGCAGTTAATTATCGTTACTCCGACCTACAACCGCGCGTTTCAGGCTTATTTCATGAACCGGTTGGGTCAGGTGCTCCGTTTGATTCCTCCTCCGGTTCTCTGGATTGTGGTTGAAATGAATCCGGCTTCAATGGAGACCGCTGAATTGTTGAGGAAAAGTGGTGTAATGTATAGGCATTTGGTTTGTACTAAGAATTCCACTGATGTGAAGGATAGAGGGGTTCATCAGAGGAATACCGCGTTGGAACACATCGAACATCATCGACTTAATGGCATTGTTTACTTTGCAGATGATGATAATATATATTCCCTACAGTTGTTTGAGACATTGAGACACATAAGTGGCTTTGGTACTTGGACTGTTGCCATGCTTGCACCAAGCAAGAACAAGGCTATTTTGGAAGGTCCCGTATGCAATGGAAGCCAAGTGATTGGATGGCACACAAATGAGAAAAGTAAAAGGCTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCTTTTAACAGCACAATTTTGTGGGATCCAAAGACATGGCGGCGCCCTACCTCAAATCCTATTCGACAGTTGGACACGGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAGAGTCACATGGAAGGTTCACCTCCTGGTTGTTCCAATATAATAAATTGGCATCTCCATTTGGATTCACATAATGTTGTTTATCCAAAGGGTTGGCTGCTACAAAAAAACTTAGATGCTGTCTTCCCCGCCAAGTAA 1209 0.4566 MASFRRTLSPAYHDRHHHNGVVSVSSPSHKFSPNSNNYSKLTSPLHALLARVAGAFAKRYGRKGQWRKTLFRCLLFFFVGFLLGMFPFGHVAVNDDIEINTPRATTTSNKAQLPRDDETGFTIDPVRLTAENHISEAVTNFRFDFAPRKQLIIVTPTYNRAFQAYFMNRLGQVLRLIPPPVLWIVVEMNPASMETAELLRKSGVMYRHLVCTKNSTDVKDRGVHQRNTALEHIEHHRLNGIVYFADDDNIYSLQLFETLRHISGFGTWTVAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKTWRRPTSNPIRQLDTVKEGFQETTFIEQLVEDESHMEGSPPGCSNIINWHLHLDSHNVVYPKGWLLQKNLDAVFPAK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0919 402 Pfam Glycosyltransferase family 43 170 378 IPR005027 GO:0015018|GO:0016020
Lan15g0919 402 PANTHER GLYCOSYLTRANSFERASES 1 399 - -
Lan15g0919 402 CDD GlcAT-I 151 379 IPR005027 GO:0015018|GO:0016020
Lan15g0919 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 150 394 IPR029044 -
Lan15g0919 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 150 395 IPR029044 -
Lan15g0919 402 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 399 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0919 Lan-Chr15 18494765 18497732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0919 1 402 Glycosyltransferase AT1G27600 60.636 1.88e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0919 K20869 - gmx:100809892 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0919 15 18494765 18497732 Lan14g0714 14 14136871 14139894 LSH
Lan15g0919 15 18494765 18497732 Lan3g1510 3 26593872 26598201 LSH