Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1506 ATGGTGAATCCGTTGGTGGCTCGTGCGACGAGTGACATGCTAATCGGTCCTGATTGGGCTTTGAACATCGAGATCTGTGACGTACTCAATCGTGACCCTGGGCAAGCAAAGGATGTTGTAAAAGGTATAAAGAAGCGGATTGGGAGTAGAAATTCTAAAAGTCAACTTCTTGCACTAACTCTGCTGGAGACTATTATAAAGAATTGCGGGGACATTGTTCACATGCATGTTGCAGAGAGAGATATTCTTCATGAGATGGTGAAAATAGTTAAGAAGAAGCCTGATCCTCATGTTAGAGAGAAGATACTGACTCTAATAGATACATGGCAAGAAGCTTTTGGAGGGGCAAGGGCAAGATATCCACAGTATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGACAGTATTCCCTCAAAGGTCTGAGCCATCTGCACCTGTATTCACACCACTACAAACACATCCATTGGCATCATACCCTCAAAATGTACGTGATTCTGATGCTTCTCAGGGCACAGCTGAATCCTCTGCAGAGTCGGATTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGCGGTATTATGGATGTTCTTTCTGAAATGCTCAATGCGATAGATCCTGATAATAAAGAAGGACTTAGTCAGGAGGTTATTGTTGATCTGGTGGAACAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAACTCAACTACGGACGAATCACTGCTATGTCAAGGACTTTCTCTAAATGATGATCTGCAGCGTCTATTAGCCAAGCATGAATCCATTTCCTCAGGAACTTCTGCTCAAAATCACACTGAGAAACCTAAGATTGAACCTTCTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTGATACGGGAAATACTAGTAATCAAACTCATGGATCCTCTTCTAATGCTGAAGCAGGGTCCCAGACATTGAATCAGTTATTGCTACCTGCACCTCCCACATCAAATGGATCTGCTCTCCCTGCAAAGATTGATCCCAAATGGGATCTGCTCAGTGGTGATGACTATAACTCACCAAAAACAGAGAATTCACTTGCTCTTGTTCCTGTAGGAGAACAGCAGCCAACCAGTCCTATGTCTCAACAGAATGCTCTTGTTCTTTTTGATATGTTTTCTAATAGTAACAATGCATCAACTGCTGTCAACGCCCAGCCAACTAATGTTGCTAGCCAAACCAATCAATTAGGTCCCCAATTTCAACAACAGCAAACTTTCATATCTCCAAGTGCACTTTACCCCAATGGAAATGTGCCAAATGGGGGCTCACCTCGGTACGAGCATTCACCATATACACAAAGCATAGATCCTGCCTGGAGTGGTCAGGCCGTGCAGCAGCAACCGCCTTCACCATTTCACGGTACACCGAGTATTGGATCATTGCCGCTGCCTCCATGGGAATCTCAACCCGCAGACAATGGTAGTCCAGTAGCAGGCACTCCATATCCACAACCACTGCAAGCCTCTCAAATGGTACAGAATGCTGCATATCCCCAGGGACCTCAAGCAATGGGAAATGACCACGCCGTTGGTATGTACATGCAGCCAAATGCTAACAGCCATTTGTCAACAATCAATAACCATGTTGGTCAAAGCAATCAAGTCGGCATGCACCCGCAGTATATTCAAGGTGCTGCAGGTCCCTATGTGGGAATGGTTCCACATCAAATGCAAAATGGTTCTGCTGTGTCCATGTATCCACAACAGATGTATGGCAACCAATTCACGGGATATGGCTATGGTCAGCAACAAGGGGTTCAATATGTTGAGCAGCAAATGTATGGTCTATCTATGAGAGATGATAGTGGTCTGAGAAATTCACATCAGGTTTCTGCTGCATCTTATGTGCCATCTGGGAAACCTTCCAAGCCAGAGGATAATTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAGCCAAAATCTCCTCCTGGCCGAGCCGGTAGCATGTAG 1992 0.4488 MVNPLVARATSDMLIGPDWALNIEICDVLNRDPGQAKDVVKGIKKRIGSRNSKSQLLALTLLETIIKNCGDIVHMHVAERDILHEMVKIVKKKPDPHVREKILTLIDTWQEAFGGARARYPQYYAAYQELLRAGTVFPQRSEPSAPVFTPLQTHPLASYPQNVRDSDASQGTAESSAESDFPTLSLTEIQNARGIMDVLSEMLNAIDPDNKEGLSQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLSLNDDLQRLLAKHESISSGTSAQNHTEKPKIEPSGALVDVDGPLVDTGNTSNQTHGSSSNAEAGSQTLNQLLLPAPPTSNGSALPAKIDPKWDLLSGDDYNSPKTENSLALVPVGEQQPTSPMSQQNALVLFDMFSNSNNASTAVNAQPTNVASQTNQLGPQFQQQQTFISPSALYPNGNVPNGGSPRYEHSPYTQSIDPAWSGQAVQQQPPSPFHGTPSIGSLPLPPWESQPADNGSPVAGTPYPQPLQASQMVQNAAYPQGPQAMGNDHAVGMYMQPNANSHLSTINNHVGQSNQVGMHPQYIQGAAGPYVGMVPHQMQNGSAVSMYPQQMYGNQFTGYGYGQQQGVQYVEQQMYGLSMRDDSGLRNSHQVSAASYVPSGKPSKPEDNLFGDLVNMAKVKPKSPPGRAGSM* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1506 663 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Lan3g1506 663 Gene3D - 184 275 IPR038425 -
Lan3g1506 663 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Lan3g1506 663 MobiDBLite consensus disorder prediction 423 491 - -
Lan3g1506 663 MobiDBLite consensus disorder prediction 266 314 - -
Lan3g1506 663 MobiDBLite consensus disorder prediction 295 314 - -
Lan3g1506 663 Gene3D - 1 148 IPR008942 -
Lan3g1506 663 CDD VHS 2 132 - -
Lan3g1506 663 CDD GAT_GGA_like_plant 188 266 - -
Lan3g1506 663 MobiDBLite consensus disorder prediction 158 181 - -
Lan3g1506 663 PANTHER TARGET OF MYB PROTEIN 1 1 655 - -
Lan3g1506 663 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lan3g1506 663 SUPERFAMILY ENTH/VHS domain 4 138 IPR008942 -
Lan3g1506 663 Pfam VHS domain 5 130 IPR002014 GO:0035091|GO:0043130
Lan3g1506 663 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Lan3g1506 663 SUPERFAMILY GAT-like domain 143 269 - -
Lan3g1506 663 MobiDBLite consensus disorder prediction 439 467 - -
Lan3g1506 663 PANTHER TOM1-LIKE PROTEIN 1 655 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1506 Lan-Chr3 26571518 26579134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1506 - - lang:109328367 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1506 3 26571518 26579134 Lan3g1506 3 26571518 26579134 ECH
Lan15g0951 15 18828048 18834128 Lan3g1506 3 26571518 26579134 LSH
Lan14g0747 14 14454275 14461261 Lan3g1506 3 26571518 26579134 LSH