Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0951 ATGCGAGTCATGCCACCCCTTTCTTACTTTCCATTATACACCCCCACTTTTTCTTCAACGGAATTCCTCTCTAGAGAGAGAGAGAAGAGAGAGAGAGGTTATTACACGCCGTGTTGGCGTATCACCGGAATTGATCTTCGATCGCATCGGAATTTCATTATTCGAACAGAGATGGTGAATCCGTTGGTGGCGCGTGCCACGAGCGACATGCTTATCGGTCCTGATTGGGCTTTGAATATCGAGATCTGTGACGTACTCAACCGTGACCCTGGGCAAGCCAAGGATGTTGTTAAAGGTATCAAGAAGCGGATTGGAAGTAGAAATTCTAAAACTCAACTTCTTGCACTAATTTTGCTGGAGACTATCGTAAAGAATTGTGGGGACATTGTTCACATGCATGTTGCAGAGAGAGATGTTATTCAGGAGATGGTTAGAATAGTAAAGAAGAAGCCCGATCCTCATGTTAGAGAGAAGATACTGATTCTAATAGATACATGGCAAGAAGCTTTTGGAGGGCCAAGGGCAAGATATCCACAGTATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAAAGGTCTGAGCAATCTGCACCTGTATTCACACCGCTACAGACACATCCATTGACATCTTACCCTCAAAATATACGTGATTCTGATGCTCGTTTGGGCACAGCTGAATCCTCTGTAGAGTCCGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTTCTGAAATGCTCAATGCGATAGATCCTGCCAATAAAGAAGGTCTTAGTCAGGAGGTTATTGTTGATTTGGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAACTCAACCACGGACGAGTCACTCCTATGCCAAGGACTTTCTCTAAATGATGATCTGCAGCGTCTGCTGGCCAAGCATGAATCGATTTCCTCAGGAACTTCTGCTCAAAATCACACCGAAAAACCAAAGACTGAACCTTCTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTGATACTGGAAATACTAATAATCAAACTCATGGATCCTCTGCTAGTACTGAAGCAGGGTCCCAAACATTGAATCAGTTATTGCTACCTGCACCCCCCACATCAAATGGTTCAGCTCTCCCTGCAAATCCCAAATTTGACCTGCTCAGCGGTGACCTGCTCAGTGGTGATGACTATAACTCACCAAAAACAGAGACTTCACTCGCTCTTGTTCCTGTAGGTGAACAACAGCCAGCCAGTCCTATATCTCAGCAGAATGCTCTTGTACCTTTTGACATGTTTTCTAATGGTAGCAATGCATCAACTTCTGTCAATGCCCAGCCAACTAATGCTGTTGGCCCAACCAATACATTAGGCCCCCAATTTCAACAACAACAATCTTTCATATCTCAAGGTGCATTTTACCCCAATGGGAATGTGCCAAATGGAGGCTCACCTCGGTACGGGCAATCACCATATGCACAAAGCACAGATCCTGCTTGGAATGGTACACCAAGTATTGGATCATTGCCACCGCCTCCCTGGGAAGCTCAACCGACAGACAATGGTAGTCCAGTAGCAGGCAGTCAATATCCACAACCACTGCAACCCACTCAAATGGTACAGAATGCTGCATATCCTCAGGGACCTCAATCAATAGGAAACGACCATGCCGCCGGTATGTACATGCAGCCAAATGCTAACAGCCATTTGTCAACATTCAATAACCATGTTGGTCAAAGCAATCAAGTCAGCATGCATCCACAGTATATCCAGGGTGCTGCAGGTCCCTATATGGGAATGGTTCCACAACAAATGCAAAATGGTCCTGCCGCGTCCATGTATCCACAATCTATGTACCCACAACAGATGTATGGCAACCAGTTCACAGGATATGGCTATGGTCAGCAACCCGGGGTTCAATATGTTGAGCAGCAAATGTATGGTCTATCTATGAGAGATGATAGTGGTCTGAGAAACCCTCACCAAGTTTCTACCGCATCGTATGCGCCATCTGGGAAGCCTTCTAAGCCAGAGGATAGTTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAGCCAAAATCTCCTCCTGGCCAAGCTGGTGGCTTGTAG 2148 0.4567 MRVMPPLSYFPLYTPTFSSTEFLSREREKRERGYYTPCWRITGIDLRSHRNFIIRTEMVNPLVARATSDMLIGPDWALNIEICDVLNRDPGQAKDVVKGIKKRIGSRNSKTQLLALILLETIVKNCGDIVHMHVAERDVIQEMVRIVKKKPDPHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPLQTHPLTSYPQNIRDSDARLGTAESSVESEFPTLSLTEIQNARGIMDVLSEMLNAIDPANKEGLSQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLSLNDDLQRLLAKHESISSGTSAQNHTEKPKTEPSGALVDVDGPLVDTGNTNNQTHGSSASTEAGSQTLNQLLLPAPPTSNGSALPANPKFDLLSGDLLSGDDYNSPKTETSLALVPVGEQQPASPISQQNALVPFDMFSNGSNASTSVNAQPTNAVGPTNTLGPQFQQQQSFISQGAFYPNGNVPNGGSPRYGQSPYAQSTDPAWNGTPSIGSLPPPPWEAQPTDNGSPVAGSQYPQPLQPTQMVQNAAYPQGPQSIGNDHAAGMYMQPNANSHLSTFNNHVGQSNQVSMHPQYIQGAAGPYMGMVPQQMQNGPAASMYPQSMYPQQMYGNQFTGYGYGQQPGVQYVEQQMYGLSMRDDSGLRNPHQVSTASYAPSGKPSKPEDSLFGDLVNMAKVKPKSPPGQAGGL* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0951 715 MobiDBLite consensus disorder prediction 664 715 - -
Lan15g0951 715 ProSiteProfiles GAT domain profile. 237 325 IPR004152 GO:0035091|GO:0043130
Lan15g0951 715 CDD VHS 59 189 - -
Lan15g0951 715 PANTHER TOM1-LIKE PROTEIN 58 707 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lan15g0951 715 CDD GAT_GGA_like_plant 245 323 - -
Lan15g0951 715 ProSiteProfiles VHS domain profile. 66 195 IPR002014 GO:0035091|GO:0043130
Lan15g0951 715 MobiDBLite consensus disorder prediction 669 683 - -
Lan15g0951 715 MobiDBLite consensus disorder prediction 323 337 - -
Lan15g0951 715 MobiDBLite consensus disorder prediction 483 515 - -
Lan15g0951 715 MobiDBLite consensus disorder prediction 483 545 - -
Lan15g0951 715 Gene3D - 55 205 IPR008942 -
Lan15g0951 715 SMART VHS_2 59 191 IPR002014 GO:0035091|GO:0043130
Lan15g0951 715 MobiDBLite consensus disorder prediction 352 371 - -
Lan15g0951 715 MobiDBLite consensus disorder prediction 323 371 - -
Lan15g0951 715 Pfam GAT domain 251 325 IPR004152 GO:0035091|GO:0043130
Lan15g0951 715 Gene3D - 240 332 IPR038425 -
Lan15g0951 715 Pfam VHS domain 59 186 IPR002014 GO:0035091|GO:0043130
Lan15g0951 715 SUPERFAMILY GAT-like domain 198 326 - -
Lan15g0951 715 SUPERFAMILY ENTH/VHS domain 61 195 IPR008942 -
Lan15g0951 715 PANTHER TARGET OF MYB PROTEIN 1 58 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0951 Lan-Chr15 18828048 18834128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0951 - - lang:109328367 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0951 15 18828048 18834128 Lan14g0747 14 14454275 14461261 LSH
Lan15g0951 15 18828048 18834128 Lan3g1506 3 26571518 26579134 LSH