Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1497 ATGCCTCCACCTAATCAACAATCGAACCGATCTCCCTCACCTTCCCAACCTTCCGGGAAGAGTGAAGTGTCTGATCTCAAATCACAGCTCCGGCAACTTGCTGGAAGCCGAGCTCCGGGTGCTGATGATGCTAAGAGGGATCTCTTCAAGAAGGTGATTTCCAACATGACAATAGGTATTGATGTCTCTGCTCTATTTGGTGAGATGGTAATGTGCTCCGCGACATCCGACATTGTTCTGAAGAAAATGTGTTATCTATATGTTGGGAATTATGCGAAGGTTAATCCTGATCTCGCGCTATTGACGATTAATTTTCTGCAAAGAGATTGCAAGGATCAGGATCCAATGATAAGGGGGTTAGCTTTGAGAAGTTTGTGTTCGCTCCGAGTGGCGAATTTGGTGGAGTATTTGGTCGGGCCATTAGAGTCTGGGTTGAAGGATAATAATAGTTATGTTAGGACTGTGGCAGTTATTGGAGTGTTGAAACTGTATCATATATCAGCTTCAACCTGTATTGATGAAGATTTTCCAGCAACCCTGAAGCATTTGTTGCTTAATGACCCGGATTCTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAGATTTGGACCTTAGAGTCAACCACGTCAGAGGAGGCGGCCAGGGAGAGAGAAACATTGACTAGCAAGCCAGTTGTATATTACCTTCTGAATCGCATTAAAGAATTTAGTGAATGGGCACAATGTCTTCTTCTGGATTTGGTTACCAAGTACATTCCATCAGATAACAATGAAATATTTGATATAATGAATCTACTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTTGTGTTGGCAACTATTAAACTATTTCTACATTTGACTTTGTCTATGGCGGATGTTCATCAGCAGGTGTATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCGGAACAATCTTATGCAATTTTAAGCCATCTACATCTCCTGGTCATGCGTGCACCGCATATATTTGCCTCAGATTACAAACATTTCTATTGCCAGTATAATGAGCCATCTTATGTCAAAAAATTGAAGCTTGAAATGCTGACTGCTGTTGCAAATGAAAGTAACACCTATGAGATAGTGACGGAGTTATGTGAATATGCGGCAAATGTTGACATTCCAATTGCAAGAGAATCAATTCGGGCTGTTGGGAAGATAGCGTTGCAACAGTATGATGTCAATGCTATTGTTGATAGGCTTCTACAGTTTCTTGAGATGGAAAAGGACTATGTTACTTCTGAAACTCTGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGGAATATCAGTAGCAAAAATGTCCATGAACCCAAGGCTAAGGCAGCGCTTATATGGATGTTGGGGGAATATTCTCAAGACATGCAAGATGCTCCATATGTCTTGGAGAGTTTAGTTGAAAATTGGGATGAGGAGCATTCAGCTGAGGTTCGCTTACATCTTCTCACTGCAGTGATGAAGTGTTTTTTTAAGAGACCGCCTGAGACTCAGAAAGCCTTAGGAGCTGCATTGGCTGCTGGTGTTGCTGATTTTCATCAGGATGTTCGTGGCAGGGCCTTATTTTATTACAGGCTTCTGCAATATAAAGTATCGGTGGCAGAGAGTGTGGTGAACCCTCCAAAGCAAGCAGTTTCAGTATTTGCTAAAACTCAGAGCAATGAAATCAAAGATCGCATATTTGATGAATTTAACACTTTGTCTGTTGTGTACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACATTTGATTTTTCAGATGAACTTGGAAATCTATCTATTACTCCAGAATCTGGAGATGTTGTTCCAGCTGAGAGAGTGGAAGCAAATGACAAGGATCTACTTCTAGGTACCACAGAAAAAGATGAAGGTAGAGATCCTAGTAGTAATGGCTCTGCCTATAGTGCTCCTTCCTATGATGGTTCATCTGCCCCTTCTGCGGCATCACAACCACTTGCAGATTTGGCATTTTCAAGTACGAGCGCACCTGGTCAAGGTCCATCATCTAGTTTGGCAATCGATGATCTGTTTGGTTTAGATTTTTCAGTTGGGACTGCAGCCACACCTTCACCTCCTTCATTGAATCTCAACGCAAAAGCTGCACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAGCTGCCAATATCTATATCAGAGGAATATTCTCTAAGTCCACAAGGAATTGCATTGTTGACATCTCCTCAGACACTACTCCAGCACATGCTAAGTCATTCAATACACTGCATTGCATCTGGTGGTCAGTCTCCTAACCTCAAGTTCTTCTTCTTTGCTCAAAAAGTGGAAGATGCATCAACTTATCTTGTAGAGTGTATAATCAACACATCGTCAGCCAAGTCACAGGTTAAAATAAAAGCCGATGACCAAAGTTCATCCCCGGCGTTTTCAACATTATTTGAATCAGCATTGTCCAAATTTGGTTTGCCTTGA 2535 0.4201 MPPPNQQSNRSPSPSQPSGKSEVSDLKSQLRQLAGSRAPGADDAKRDLFKKVISNMTIGIDVSALFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLESGLKDNNSYVRTVAVIGVLKLYHISASTCIDEDFPATLKHLLLNDPDSQVVANCLSALQEIWTLESTTSEEAARERETLTSKPVVYYLLNRIKEFSEWAQCLLLDLVTKYIPSDNNEIFDIMNLLEDRLQHANGAVVLATIKLFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPHIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSETLVLVKDLLRKYPQWSQDCIAVVGNISSKNVHEPKAKAALIWMLGEYSQDMQDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGVADFHQDVRGRALFYYRLLQYKVSVAESVVNPPKQAVSVFAKTQSNEIKDRIFDEFNTLSVVYQKPSYMFTDKEHRGTFDFSDELGNLSITPESGDVVPAERVEANDKDLLLGTTEKDEGRDPSSNGSAYSAPSYDGSSAPSAASQPLADLAFSSTSAPGQGPSSSLAIDDLFGLDFSVGTAATPSPPSLNLNAKAALDPGTFQQKWRQLPISISEEYSLSPQGIALLTSPQTLLQHMLSHSIHCIASGGQSPNLKFFFFAQKVEDASTYLVECIINTSSAKSQVKIKADDQSSSPAFSTLFESALSKFGLP* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1497 844 MobiDBLite consensus disorder prediction 656 675 - -
Lan3g1497 844 Pfam Adaptin N terminal region 36 552 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lan3g1497 844 MobiDBLite consensus disorder prediction 1 42 - -
Lan3g1497 844 MobiDBLite consensus disorder prediction 11 31 - -
Lan3g1497 844 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 17 842 - -
Lan3g1497 844 Gene3D - 712 842 IPR012295 -
Lan3g1497 844 SMART B2_adapt_app_C_2 722 839 IPR015151 GO:0006886|GO:0016192|GO:0030131
Lan3g1497 844 PIRSF Beta_adaptin 11 844 IPR016342 GO:0015031|GO:0030276
Lan3g1497 844 MobiDBLite consensus disorder prediction 632 655 - -
Lan3g1497 844 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 17 842 IPR026739 GO:0016192
Lan3g1497 844 Gene3D - 15 610 IPR011989 -
Lan3g1497 844 Pfam Beta2-adaptin appendage, C-terminal sub-domain 727 838 IPR015151 GO:0006886|GO:0016192|GO:0030131
Lan3g1497 844 MobiDBLite consensus disorder prediction 622 675 - -
Lan3g1497 844 SUPERFAMILY ARM repeat 28 599 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1497 Lan-Chr3 26491216 26497899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1497 - - gmx:100801153 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1497 3 26491216 26497899 Lan3g1497 3 26491216 26497899 ECH
Lan15g0961 15 18881226 18888526 Lan3g1497 3 26491216 26497899 LSH