Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0961 ATGGCTCCACCTCATCAACAATCTCAGCGATCTGCATCACCTTCTCAACCTTCCGGGAAGAGTGAAGTAACTGATCTCAAATCACAGCTCCGGCAGCTTGCTGGGAGCCGAGCTCCGGGTGCTGATGATGCTAAGAGGGATCTCTTCAAGAAGGTGATTTCCAACATGACCATAGGTATTGACGTCTCAGCTCTCTTTGGTGAGATGGTAATGTGCTCAGCAACATCGGACATTGTGCTGAAGAAAATGTGCTATCTATATGTTGGGAATTATGCAAAGGTCAATCCTGATCTTGCGCTCTTGACGATTAATTTTCTACAAAGAGATTGCAAGGACGAGGATCCAATGATACGGGGATTAGCTTTGAGGAGTTTGTGTTCGCTCCGAGTGGCAAATTTGGTGGAGTATTTGGTTGGGCCATTAGGTTCTGGGTTGAAGGACTATAATAGTTACGTCAGGACAGTGGCAGTTATTGGGGTGTTAAAACTGTATCATATATCAGCTTCCACCTGTATTGATGCAGATTTTCCAGCAACTCTGAAGCATTTGTTCCTTAATGACCCAGATACTCAGGTAGTCACAAATTGTTTGTCTGCTTTACAAGAGATTTGGACCTTAGAGTCAACCACGTCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTGCTTAGCAAGCCAGTTGTATATTACCTTCTAAATCGCATTAAAGAATTTAATGAATGGGCACAATGTCTTGTGCTGGAATTGGTGACCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTACTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACTAAAATATTTCTACATTTGACATTGTCTATGGCCGATGTTCATCAGCAGGTGTATGAGCGTATCAAAGCACCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCAGAACAATCGTATGCAATTTTAAGCCATCTACATCTCTTGGTCTTGCGTGCACCTTATATATTTGCCTCAGATTACAAACATTTCTATTGCCAGTATAATGAGCCATCTTATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCTGTTGCAAATGAAAGTAACACATATGAGATAGTGACGGAGCTATGTGAATATGCTGCAAATGTTGACATTCCAATTGCAAGAGAATCAATTCGGGCTGTTGGGAAGATTGCGTTGCAACAGTATGATGTCAATGCTATTGTGGATCGGCTTCTACAGTTTCTTGAAATGGAAAAGGACTATGTTACTTCTGAAACTCTGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGGAATATCAGTAGCAAAAATGTCCATGAACCCAAGGCTAAGGCAGCGCTTATATGGATGTTGGGGGAATATTCTCAAGACATGCAAGATGCTCCATATGTTTTGGAAAGTTTAATTGAAAATTGGGATGAGGAGCATTCAGCTGAGGTTCGCTTACATCTTCTTACTGCAGTGATGAAGTGTTTCTTTAAGAGGCCGCCTGAGACTCAGAAAGCATTGGGAGCTGCATTGGCTGCCGGTATTGCTGATTTTCACCAGGATGTTCATGACAGGGCCTTATTTTATTACAGGCTTCTGAAATGTAAAGTATCAGTGGCGGAGAGTGTGGTGAATCCTCCAAAGCAAGCAGTTTCTGTATTTGCTGATACGCAGAGCAATGAAATCAAAGATCGCATATTTGATGAATTTAACACTTTGTCTGTTGTTTACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACATTTGAGTTTTCAGATGAACTTGGAAATCTATCTATTAGTGCAGAACCTGGAGATGCTGTTGTTCCAGCTCAGATAGTGGAGGCAAATGACAAGGATCTACTTCTAAGTACCGAAGAAAAAGATGAAGGTAGAGAGCCTGGTATTAATGGCTCTGCCTATAGTGCTCCTTCCTATGATGGTTCATCTGCCCCTTCTGCGACTTCACAACCACTTGCAGATTTGTCATTTTTAAGTTCCAGCACACCTGGTCAAGCTCCATCATCTAGCTTGGCAATTGATGATCTGTTTGGTTTAGATTTTTCAGTTGGGACTGCAGCCACACCTTCACCTCCTTCATTGAATCTCAACCCAAAGGCTGCACTGGATCCTAGCACATTTCAGCAGAAATGGCGTCAATTGCCAATATCTATATCAGAGGAATATTCTATAAGTGCACAAGGAGTTGCATTGTTGACATCTCCTCAGACACTCCTCCGGCACATGCAAAGTCATTCAATACACTGCATTGCATCCGGTGGTCAGTCTCCTAACTTAAAGTTCTTTTTCTTTGCTCAAAAAGCGGAAGAAGCTTCATCGTATCTTGTAGAGTGTATAATCAACACATCGTCAGCCAAGTCACAAGTTAAAATAAAAGCCGATGACCAAAGTTCATCTCAGGCATTTTCAACAGTATTCCTATCAGCGTTGTCCAAATTTGGTTTGCCTTGA 2538 0.4188 MAPPHQQSQRSASPSQPSGKSEVTDLKSQLRQLAGSRAPGADDAKRDLFKKVISNMTIGIDVSALFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDYNSYVRTVAVIGVLKLYHISASTCIDADFPATLKHLFLNDPDTQVVTNCLSALQEIWTLESTTSEEAARERETLLSKPVVYYLLNRIKEFNEWAQCLVLELVTKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKIFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVLRAPYIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSETLVLVKDLLRKYPQWSQDCIAVVGNISSKNVHEPKAKAALIWMLGEYSQDMQDAPYVLESLIENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGIADFHQDVHDRALFYYRLLKCKVSVAESVVNPPKQAVSVFADTQSNEIKDRIFDEFNTLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAEPGDAVVPAQIVEANDKDLLLSTEEKDEGREPGINGSAYSAPSYDGSSAPSATSQPLADLSFLSSSTPGQAPSSSLAIDDLFGLDFSVGTAATPSPPSLNLNPKAALDPSTFQQKWRQLPISISEEYSISAQGVALLTSPQTLLRHMQSHSIHCIASGGQSPNLKFFFFAQKAEEASSYLVECIINTSSAKSQVKIKADDQSSSQAFSTVFLSALSKFGLP* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0961 845 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 17 843 - -
Lan15g0961 845 SMART B2_adapt_app_C_2 723 840 IPR015151 GO:0006886|GO:0016192|GO:0030131
Lan15g0961 845 Gene3D - 14 610 IPR011989 -
Lan15g0961 845 Gene3D - 713 843 IPR012295 -
Lan15g0961 845 Pfam Adaptin N terminal region 36 552 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lan15g0961 845 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 17 843 IPR026739 GO:0016192
Lan15g0961 845 MobiDBLite consensus disorder prediction 1 27 - -
Lan15g0961 845 SUPERFAMILY ARM repeat 28 599 IPR016024 -
Lan15g0961 845 PIRSF Beta_adaptin 11 845 IPR016342 GO:0015031|GO:0030276
Lan15g0961 845 MobiDBLite consensus disorder prediction 647 676 - -
Lan15g0961 845 Pfam Beta2-adaptin appendage, C-terminal sub-domain 726 839 IPR015151 GO:0006886|GO:0016192|GO:0030131
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0961 Lan-Chr15 18881226 18888526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0961 - - gmx:100801153 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0961 15 18881226 18888526 Lan3g1497 3 26491216 26497899 LSH