Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1496 ATGGATTATTGCTTAAGAGAGTTAGAAGGGAAACATGCTAATGACCCTTTATTCATTGTGAAAATGAATAACAAATTATCATCGTCACCATCACCATCGTCGCTGCCGAAATCATCATGTGTTTTTGTTCCAGGGCCTGTGATTGTAGGAGCAGGCCCATCAGGTTTAGCAGCAGCAGCATGTCTCAAAGAAAAAGGTGTTCCAAGTTTGATACTAGAGAGATCTAACTGCATAGCTTCTCTATGGCAACACAAAACCTATGATAGATTACACCTTCATTTACCTAAGCAATTTTGTGAGTTACCCTTAATGGGTTTTCCTTCTGATTTTCCAACATACCCAACAAAGCAACAGTTCATTGGGTACTTGGAGACTTATGCTGAGAAATTTGGCATAAGGCCAAGGTTCAATGAGACTGTGAAGCATGCTGAGTTTGATTCCAAGGTTGGGTTTTGGCACTTGAAGTGTGTTGATAAGGCTGAGATTGTGACTGAGTTTGTGTGCAAGTGGTTGATTGTGGCCACAGGAGAAAATGCAGAGGCTGTGGTGCCTAATATTCAAGGGGTTGAGGAATTTGGAGGTTCTATAAAGCACACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAAAGTTTTGGTGGTTGGTTGTGGAAATTCAGGGATGGAAGTGTGCTTAGATCTTTGCAACCATGATGGTAGTCCTTCTCTTGTGGTTAGAGATACGGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTAAAGTGGTTACCCATAAGACTTGTCGATAGGTTCTTACTTATAATTTCATGGCTCATGCTTGGTAACACTTCTCAGTTGGGTTTGGATCGGCCAAGTTTGGGTCCCCTTGAACTCAAAAACCTGTCCGGAAAGACCCCTGTCCTAGACGTGGGTACCCTTGCTAAGATTAAAGGTGGAGACATTAAGGTACGTCCAAGCATAAAGCGGCTAAAACTTCATACAGTAGAATTTGTAGATGGAAAACAAGAGAATTTTGATGCCATTATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTAAAGGAAGAGAGTATGTTCTCTAAGGAAGATGGGTTCCCAAAGAAGCCATTCCCAAATGGGTGGAAAGGTGAAAATGGAGTTTATGCTGTGGGTTTTACAAAAAAGGGACTACTTGGTGCATCCATGGATGCAAAGAAAATAGCTGAAGATATTGAAAGGTGTTGGAAATATGAGGCAAAGCATAGTAGTATATTTGCTCGTTCACTTTTGCTGCAATCAAATTCATAA 1326 0.4118 MDYCLRELEGKHANDPLFIVKMNNKLSSSPSPSSLPKSSCVFVPGPVIVGAGPSGLAAAACLKEKGVPSLILERSNCIASLWQHKTYDRLHLHLPKQFCELPLMGFPSDFPTYPTKQQFIGYLETYAEKFGIRPRFNETVKHAEFDSKVGFWHLKCVDKAEIVTEFVCKWLIVATGENAEAVVPNIQGVEEFGGSIKHTSLYKSGEEFRGKKVLVVGCGNSGMEVCLDLCNHDGSPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPIRLVDRFLLIISWLMLGNTSQLGLDRPSLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPSIKRLKLHTVEFVDGKQENFDAIILATGYKSNVPYWLKEESMFSKEDGFPKKPFPNGWKGENGVYAVGFTKKGLLGASMDAKKIAEDIERCWKYEAKHSSIFARSLLLQSNS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1496 441 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 33 428 - -
Lan3g1496 441 SUPERFAMILY FAD/NAD(P)-binding domain 47 246 IPR036188 -
Lan3g1496 441 Pfam Flavin-binding monooxygenase-like 48 373 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lan3g1496 441 Gene3D - 46 426 IPR036188 -
Lan3g1496 441 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 33 428 - -
Lan3g1496 441 SUPERFAMILY FAD/NAD(P)-binding domain 209 421 IPR036188 -
Lan3g1496 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 46 65 - -
Lan3g1496 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 168 186 - -
Lan3g1496 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 230 - -
Lan3g1496 441 PRINTS Pyridine nucleotide disulphide reductase class-II signature 45 67 - -
Lan3g1496 441 PRINTS Pyridine nucleotide disulphide reductase class-II signature 208 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1496 Lan-Chr3 26462746 26467417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1496 K11816 - gmx:100804746 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1496 3 26462746 26467417 Lan3g1496 3 26462746 26467417 ECH
Lan15g0963 15 18899216 18903133 Lan3g1496 3 26462746 26467417 LSH