Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0963 ATGGATTATTGCTTGAGAGAGTTAGAAGGAAAGAAAGCTAATGACCCTTTATTCATTGAAAAAATGAATAACAAATCATTGTCACCAAGATCAACATGTGTTTTTGTTCCAGGGCCTGTGATTGTAGGAGCAGGCCCATCAGGGTTAGCAGCTGCAGCATGTCTCAAAGAGCAAGGTGTACCAAGTTTAATACTTGAAAGATCTAACTGCATAGCTTCTCTTTGGCAACACAAGACTTATGATCGGTTACACCTTCATTTACCTAAGCAATTTTGTGAACTTCCCTTGATGGGGTTCCCTTCTGATTTCCCAACATACCCAACAAAGCAACAGTTCATAGGGTACTTGGAGACTTATGCTGAGAAATTTGGTATTAAGCCAAGGTTCAATGAGACTGTGAAGCTTGCTGAATTTGATTCCAAGGTTGGGTTTTGGCGCTTGAAGTGTGTTGATAAGGCTGATATTGTGACTGAGTTTGTGTGTAAGTGGTTGATTGTGGCTACAGGAGAGAATGCAGAGGCTGTGGTGCCTAATATTGAAGGGGTAGAGGAATTTGGAGGTTGTATAAAGCATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAAAGTTTTGGTGGTTGGGTGTGGGAATTCAGGAATGGAAGTGTGCTTAGATCTTTGCAACAATCATGCTACTCCTTCTCTTGTGGTTAGAGATACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTATTGAAGTGGTTGCCCATGCAACTTGTCGATAGGTTCTTACTTATTATCTCATGGCTCATGCTTGGTGACACTTCTAGGTTGGGTTTGGATCGTCCAAGTTTGGGTCCCCTTCAACTCAAAAATCTCTCAGGAAAGACCCCTGTCCTAGATGTGGGTACCCTTGCTAAGATTAAAGGTGGAGATATTAAGGTACGTCCAAGCATAAAGCGGCTAAAACTTCATACAGTTGAATTTGTAGATGGAAGAAAAGAGAATTTTGATGCCATCATTTTAGCAACTGGTTACAAAAGCAATGTACCCAATTGGCTACAGGATGAGAGTATGTTCTCAAAGGAAGATGGGTTCCCTAGGAAGCCATTCCCAAATGGGTGGAAAGGTGAAAATGGTCTTTATGCTGTGGGTTTTACCAAAAAGGGACTTCTTGGTACATCCATTGATGCTAAGAGAATAACTCAAGATATTGAACGGTGTTGGAAAGATGAGGCAAAACATACTAGTGCTTTTGCTCGTTCACTTTTGCTGCAATCAAATCCATAA 1305 0.4123 MDYCLRELEGKKANDPLFIEKMNNKSLSPRSTCVFVPGPVIVGAGPSGLAAAACLKEQGVPSLILERSNCIASLWQHKTYDRLHLHLPKQFCELPLMGFPSDFPTYPTKQQFIGYLETYAEKFGIKPRFNETVKLAEFDSKVGFWRLKCVDKADIVTEFVCKWLIVATGENAEAVVPNIEGVEEFGGCIKHTSLYKSGEEFRGKKVLVVGCGNSGMEVCLDLCNNHATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMQLVDRFLLIISWLMLGDTSRLGLDRPSLGPLQLKNLSGKTPVLDVGTLAKIKGGDIKVRPSIKRLKLHTVEFVDGRKENFDAIILATGYKSNVPNWLQDESMFSKEDGFPRKPFPNGWKGENGLYAVGFTKKGLLGTSIDAKRITQDIERCWKDEAKHTSAFARSLLLQSNP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0963 434 Pfam Flavin-binding monooxygenase-like 41 364 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lan15g0963 434 Gene3D - 39 420 IPR036188 -
Lan15g0963 434 SUPERFAMILY FAD/NAD(P)-binding domain 202 393 IPR036188 -
Lan15g0963 434 PRINTS Pyridine nucleotide disulphide reductase class-II signature 38 60 - -
Lan15g0963 434 PRINTS Pyridine nucleotide disulphide reductase class-II signature 201 225 - -
Lan15g0963 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 39 58 - -
Lan15g0963 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lan15g0963 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 205 223 - -
Lan15g0963 434 SUPERFAMILY FAD/NAD(P)-binding domain 40 238 IPR036188 -
Lan15g0963 434 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 26 423 - -
Lan15g0963 434 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 26 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0963 Lan-Chr15 18899216 18903133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0963 K11816 - gmx:100804746 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0963 15 18899216 18903133 Lan3g1496 3 26462746 26467417 LSH