Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1465 ATGGAAGCATTATCATCTTCATCACCATCTGCGACAATAGCACAGCAAACATGGGAACTCGAAAACAACATCATTCCAATAGACACTCCTTCTTCAACCACCAACGCCGACGATTCCATCTTCCACTATGATGAAGCTTCTCAGAACCAATTTCACCGCGAAAGACCTTGGATCAACGATCCTCACTATTTCAAACGCGTCAAGATCTCCGCACTCGCTCTCCTCAAGATGGTTGTTCACGCGCGCTCTGGTGGCACCATTGAAGTTATGGGTTTAATGCAAGGGAAGACAGAAAAAGATTCAATTATTGTTATGGACGCTTTTGCCCTTCCCGTTGAAGGTACTGAGACTCGTGTTAATGCTCAAGCTGATGCGTATGAATACATGGTTGATTATTCACAGACCAATAAGCAGGCAGGCCGGTTGGAGAATGTCGTAGGATGGTATCATTCTCATCCTGGTTATGGATGCTGGCTCTCTGGTATAGACGTGTCTACGCAGATGCTGAACCAGCAGTTTCAGGAGCCTTTTCTGGCTGTTGTGATTGACCCAACAAGGACTGTTTCTGCTGGAAAAGTTGAGATTGGGGCATTCAGAACCTACCCTGATGGTTATAAGCCGCCGGATGAACCTATTTCTGAATATCAGACCATACCTCTCAATAAGATTGAAGACTTTGGTGTCCACTGTAAACAGTATTATTCTTTGGATATCACTTACTTCAAGTCTTCCCTTGACTCACACCTGTTGGATCTGCTATGGAACAAGTATTGGGTGAATACACTATCATCTTCTCCTCTGTTGGGTAACGGAGACTACGTTGCTGGACAAATCTCAGATTTAGCTGAAAAATTAGAACAAGCAGAGAATCAGTTGGCACACTCTCGCTTTGGATCATTAATAGCTCCTTCTCCTAGAAAGAAAGAAGAAGAATCTCCACTTGCTAAGATTACTCGCGATAGTGCGAAAATAACCGTCGAGCAAGTGCATGGTCTGATGTCACAGGTAATCAAGGACATCCTGTTCAATTCTGTTCATCAAACAAACAAGTCCCACACGGAAACATCTGACTCTGAACCAATGATTGAGAGCTGA 1095 0.4393 MEALSSSSPSATIAQQTWELENNIIPIDTPSSTTNADDSIFHYDEASQNQFHRERPWINDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTEKDSIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPDGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGSLIAPSPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQTNKSHTETSDSEPMIES* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1465 364 ProSiteProfiles MPN domain profile. 67 204 IPR037518 -
Lan3g1465 364 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 30 356 - -
Lan3g1465 364 PANTHER BNAC07G13420D PROTEIN 30 356 IPR037740 GO:0004222|GO:0008180
Lan3g1465 364 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 64 175 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lan3g1465 364 SUPERFAMILY JAB1/MPN domain 66 204 - -
Lan3g1465 364 Gene3D Cytidine Deaminase, domain 2 6 269 - -
Lan3g1465 364 SMART pad1_6 66 203 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lan3g1465 364 Pfam Cop9 signalosome subunit 5 C-terminal domain 263 343 IPR040961 -
Lan3g1465 364 CDD MPN_RPN11_CSN5 56 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1465 Lan-Chr3 26209554 26213247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1465 K09613 - gmx:100817371 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0989 15 19111865 19115684 Lan3g1465 3 26209554 26213247 LSH