Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1461 ATGAACCCAGAGCTTGAGGCTTGGACAGCTTTTGTTGCAATTTTATTGTTTATAGGTTTTATTCTGAAAGATTCAATAATAGGAGGAAAGAATTCAAGAGAATCTGAAAGTAGTAGTAGAAGACATGTTCCTTCATCTTCATGGGATCATAACAATTATGATTATGTTGGTGTGTACCAATCATCACAATCACTATACCCATCTCACCAATCTTCATGGGATCATAACAATTATCAAACACATGAAAACAACCATGCATCAGTGTCAGCACCAGTTCATGATTATGGCCAAAACCCAAGAAGAATGTTGGATAGAAAGTATTCTAAGATTGCTGATAATTACTATTCTTTGGATGAGGTTACTGCTGCTCTTGCAAATGCTGGCTTGGAATCTTCTAATCTCATTGTCGGCATCGATTTTACGAAGAGCAATGAGTGGACAGGGAAGAGGTCATTCAAACGAAAGAGTTTGCATCACATCGGAAGTGGTTATAATCCTTATGAACAGGCGATCTCAATTATCGGGAAAACATTATCTGTTTTCGATGAGGATAATTTGATTCCTTGTTTCGGATTTGGAGATGCATCAACACATGATCAAGATGTATTTTCATTCCATTCCGATGAGAGGTTCTGCAACGGGTTTGAGGAAGTTTTGATGCGATACAGAGAAATTGTTCCTCACCTCAAACTTGCAGGACCCACTTCATTTGCCCCGATTATTGAGATGGCCATGACGATTGTTGAACAAAGTGGTGGCCAATATCATGTCTTGCTTATAATTGCCGATGGACAGGTGACCCGAAGCATTGACACGCAGCATGGCCACTTAAGTCCACAGGAAAAGAAGACAATAGATGCAATTGTAAAAGCAAGTGAGTATCCACTTTCCATAGTTTTGGTTGGAGTTGGGGATGGACCGTGGGACATGATGAAAGAATTCGACGACAACATCCCTTTGCGAGCGTTCGACAATTTTCAGTTTGTGAATTTTACGGAAATAATGTCGAAGAATGATGATGCAACTAGAAGAGAAGCCGAGTTTGCCCTTGGAGCCTTGATGGAGATACCTTCTCAATACAAGGCAACCATAGATCATGGCATATTGGGTACAAGGAGGGGACATTCACCAGATAGGGTAGCTCTACCCCCACCTCCTTATGGTATCGGTACGACTTCATCTAGCAACACTGGAAGATCCTTCCGATCGAATAGTTTTCAGCAGAGTGCGCCTACTGATACTGGTGGAGGTCACACAAAACCGTCTTCGAGTTCTTTATATGATAACAGGGTTTGCCCTATATGTCTTACTAATGCAAAGGATATGGCCTTTGGTTGTGGGCATCAGACTTGTTGTGAATGTGGAGAAGACCTTGAATTATGTCCGATATGCCGGAGCGCAATCCAGGCCAGAATAAGGCTTTTCTAG 1428 0.416 MNPELEAWTAFVAILLFIGFILKDSIIGGKNSRESESSSRRHVPSSSWDHNNYDYVGVYQSSQSLYPSHQSSWDHNNYQTHENNHASVSAPVHDYGQNPRRMLDRKYSKIADNYYSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFKRKSLHHIGSGYNPYEQAISIIGKTLSVFDEDNLIPCFGFGDASTHDQDVFSFHSDERFCNGFEEVLMRYREIVPHLKLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSIDTQHGHLSPQEKKTIDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPLRAFDNFQFVNFTEIMSKNDDATRREAEFALGALMEIPSQYKATIDHGILGTRRGHSPDRVALPPPPYGIGTTSSSNTGRSFRSNSFQQSAPTDTGGGHTKPSSSSLYDNRVCPICLTNAKDMAFGCGHQTCCECGEDLELCPICRSAIQARIRLF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1461 475 Pfam Copine 156 369 IPR010734 -
Lan3g1461 475 PANTHER RING-FINGER PROTEIN 28 475 - -
Lan3g1461 475 ProSiteProfiles Zinc finger RING-type profile. 432 465 IPR001841 -
Lan3g1461 475 MobiDBLite consensus disorder prediction 373 424 - -
Lan3g1461 475 Pfam Zinc finger, C3HC4 type (RING finger) 429 469 - -
Lan3g1461 475 PANTHER COPINE FAMILY PROTEIN 1 28 475 - -
Lan3g1461 475 SUPERFAMILY RING/U-box 425 470 - -
Lan3g1461 475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 475 IPR013083 -
Lan3g1461 475 CDD RING-HC_RGLG_plant 431 475 IPR045317 GO:0061630|GO:0070534
Lan3g1461 475 MobiDBLite consensus disorder prediction 388 424 - -
Lan3g1461 475 SUPERFAMILY vWA-like 132 315 IPR036465 -
Lan3g1461 475 SMART VWA_4 131 334 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1461 Lan-Chr3 26166737 26170949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1461 K16280 - gmx:100798816 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0047 15 298807 302702 Lan3g1461 3 26166737 26170949 LSH