Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1457 ATGGAAGAAACCGGTTACATTATCCGGTCACCTGGAAACTTAAACCCAACAGCTGAAGAGTTCATACCCACTAACCCTATTCATTTTCCACCGGCTACCGTTTTCACCGTTCCTATTCCCGTTGGTGTTTTCTACGCTACTCCTCACTTATCATACTCCACACTACAACAACCACTACCACCACCACCGAACCTTGCCACGTCATCAACTCGTTCATTACTCATAAGTTCACTCGCTTCAAACGTTTTCATCACTGAGTCACTGTTAAGAAGAGAACTCGAAGTTTTCGGTGACGTCAGAGGGGTACAAATGGAAAACTTATTAATTAACGGAACCGTTACGGTTCATTTCTATGATTTGAGACATGCTGAAACGGCGTTGACGGAGATTCAGGGACAACATATGATGCAACAAGCGAGGCTTCGAAACTACTATTATTATGGTAACGGTTCGTTTAATGCGGCGCCGCCGGTTCCACCGGCGGCGCGTGGGGTTGTTGGTGGACGCGCGGTGTGGGCACAGTTTGTTGTTGCGGCGTGTGATGATGTTATTGATGGTCAGAACCAAGGGACTATTGTGGTTTTGAATTTGGATTGTGGGGTTTCGATGAAGAATGTTCGACAAGTTTTTGAGCCTTTTGGTCCAATAAAGGAATTGAGAGAAACACCAAGTAAAAAGAACCAAAGATTTGTGGAGTTTTTTGACATAAGAGATGCAGCCAAAGCTTTGAAAGAAATGAATGGGAAAGAAATTTATGGAAAAGTTGTTGTTATTGAGTTTAGTAGAGTAGGAAGTTACAGCAGAAAGTACTTCCATTCAAATAAGCCTCTCAACTTTCATAACAATGTTCCTCCACATCCATCACCCTCGCACTTTTCTCCTCCTACCCCGCCGCAGTCGCATCGAAAATTCTCCACTCCTTTTGTTTCTAATGCAACTAATTCTAATCCTCACTCACATTTGCCTCAGCTGCAGTTACCTTTCAAGAAACCGTCAAGTGTTTACAAGAGAAGTTCGAAGAAGATAGCGAATTCGGCAGGGTCTATTGAAGAAGCAATTGGTTCAGCGAATTTGAGTGAGGAAATTGGTAATGTTGTTGAAAAACAGCAAGATCAATATTCAAATGGATCTTCAAGGAGGGATGAGACTATAATTGCAAACACAAAGCATCAACCGGAAGTAAATCGAGATAATAGGCATTGGAAGGGAAAGCAAGGAAAGAATCAAGATACTCGATTTCTGATTAAAGAAGATGCAATTGTAGAATCTGATACTAGAGATACTAGAACAACTGTGATGATCAAGAACATACCCAACAAGTACAGTCAGAAGTTGCTACTAAACATGCTGGACAACCACTGCATACAGTGTAATGAACAGATTGGTGATGACAATGACCAACCTTATTCATCCTATGACTTTGTTTACCTTCCCATTGATTTCAACAACAAGTGCAATGTAGGATATGGATTTGTGAATATGACATCACCAGAGGCAACACTGAGGCTTTATAAGGCTTTCAATCATCAACATTGGGAGGTTTTTAATTCCAGAAAAATATGTCAAATTACCTATGCTAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCATTTCAAGAACTCAAAGTTCCCATGTGAGGTAGATCATTACATGCCAGTGTTGTTTTCTCCACCTAGAGATGGTAAGAATGAATTAACAGAACCTCTTCCATTAGTTGGAAACAACAATCACCACTTCCACCAAACCATTCCAATTCCTCAGATACTACAAGAGCACTGCAATGAAGATAGTGAGTGTTAA 1800 0.41 MEETGYIIRSPGNLNPTAEEFIPTNPIHFPPATVFTVPIPVGVFYATPHLSYSTLQQPLPPPPNLATSSTRSLLISSLASNVFITESLLRRELEVFGDVRGVQMENLLINGTVTVHFYDLRHAETALTEIQGQHMMQQARLRNYYYYGNGSFNAAPPVPPAARGVVGGRAVWAQFVVAACDDVIDGQNQGTIVVLNLDCGVSMKNVRQVFEPFGPIKELRETPSKKNQRFVEFFDIRDAAKALKEMNGKEIYGKVVVIEFSRVGSYSRKYFHSNKPLNFHNNVPPHPSPSHFSPPTPPQSHRKFSTPFVSNATNSNPHSHLPQLQLPFKKPSSVYKRSSKKIANSAGSIEEAIGSANLSEEIGNVVEKQQDQYSNGSSRRDETIIANTKHQPEVNRDNRHWKGKQGKNQDTRFLIKEDAIVESDTRDTRTTVMIKNIPNKYSQKLLLNMLDNHCIQCNEQIGDDNDQPYSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFNHQHWEVFNSRKICQITYARVQGLEALKEHFKNSKFPCEVDHYMPVLFSPPRDGKNELTEPLPLVGNNNHHFHQTIPIPQILQEHCNEDSEC* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1457 599 Gene3D - 181 262 IPR012677 -
Lan3g1457 599 MobiDBLite consensus disorder prediction 281 302 - -
Lan3g1457 599 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 192 256 IPR000504 GO:0003723
Lan3g1457 599 PANTHER TERMINAL EAR1-LIKE 1 35 578 - -
Lan3g1457 599 SUPERFAMILY RNA-binding domain, RBD 190 511 IPR035979 GO:0003676
Lan3g1457 599 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 190 263 IPR000504 GO:0003723
Lan3g1457 599 CDD RRM3_EAR1_like 429 530 IPR034458 -
Lan3g1457 599 Pfam RNA recognition motif 2 429 539 IPR007201 -
Lan3g1457 599 Gene3D - 374 539 IPR012677 -
Lan3g1457 599 SUPERFAMILY RNA-binding domain, RBD 55 137 IPR035979 GO:0003676
Lan3g1457 599 SMART rrm1_1 191 259 IPR000504 GO:0003723
Lan3g1457 599 SMART rrm1_1 72 142 IPR000504 GO:0003723
Lan3g1457 599 PANTHER RNA BINDING PROTEIN 35 578 - -
Lan3g1457 599 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 142 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1457 Lan-Chr3 26119087 26123051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1457 - - lang:109344156 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0044 15 274390 277997 Lan3g1457 3 26119087 26123051 LSH