Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1450 ATGGCTTCTTCGTATGATGTGGATGGAGGAAAGCCTCTACCAAAATTTGGAGATTGGGATGTGAATGATCCAGCTTCAGCTGAAGGATTCACTATTATATTCAACAAAGCAAGAGATGAGAAGAAAATTGCATCAGCATCTGGAAGATTTCCTTCACAAAGAAGATATGATTCTCGCAGCACCAAGGGTCAAAATAATTTGAATAAACAATCCTCAAAGAAAAAATGGTTTTGCTTTGGCCCTTAG 246 0.3821 MASSYDVDGGKPLPKFGDWDVNDPASAEGFTIIFNKARDEKKIASASGRFPSQRRYDSRSTKGQNNLNKQSSKKKWFCFGP* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1450 81 MobiDBLite consensus disorder prediction 44 81 - -
Lan3g1450 81 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 9 42 IPR008700 -
Lan3g1450 81 PANTHER PROTEIN NOI4 8 67 - -
Lan3g1450 81 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 8 67 IPR040387 -
Lan3g1450 81 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1450 Lan-Chr3 26068486 26069742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1450 - - gmx:102669045 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0216 14 2490079 2490829 Lan3g1450 3 26068486 26069742 LSH