Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0216 ATGGCTTCGTATAATGAAGAAGGAGGAAAAGCTTTACCAAAATTTGGGGAATGGGATGTAAATGATCCAGCATCAGGTGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGAAAAGAAACTTGCTTCAACATCTGCAAGATTTCCTTCACAAAGAAGATATGATTCTCGCAGCACCAAAACTCATCAACATAATAATAAATTGAAACAATCCTCAAAGAAAAAATGGTTTTGCTTTGTCCCTTTTACAAAAGAATAA 261 0.3448 MASYNEEGGKALPKFGEWDVNDPASGEGFTVIFNKARDEKKLASTSARFPSQRRYDSRSTKTHQHNNKLKQSSKKKWFCFVPFTKE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0216 86 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Lan14g0216 86 MobiDBLite consensus disorder prediction 40 72 - -
Lan14g0216 86 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 80 IPR040387 -
Lan14g0216 86 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0216 Lan-Chr14 2490079 2490829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0216 - - gmx:102669045 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0216 14 2490079 2490829 Lan3g1450 3 26068486 26069742 LSH