Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1428 ATGAAGAACCATGAAACTAGAGTCCATGAACTCATTTCCTTGTCCTTCTTTGTTCTCATTGTGTGTGGAACATTAGCCACGGTTAATGGAGCAGATGATTTAGCCACGAAATGTGGCCAAGTCGTGGAGAAAGTGATTCCGTGCTTGAGTTTTGCGACGGGTAAAGCAGCGACACCAACAAAAGAGTGTTGTGATGCAGCTACGGAAATAAAAGAGAGTAACCCACAATGCTTATGTTATATAATTCAACAAACTCATAAGGGAAGCCCTCAAAGCAAACAAATGGGGATCCAAGAAGATAAGCTTCTTCAACTCCCTTCTGTTTGTAATGTTAAAAATGCCAGCATCAGCCAATGCCCTAAATTATTGGGTCTATCTCCAAGTTCACCAGATGCTGCTATATTTACAAATGCTTCAAAGCTAACTCCAACTTCATCAGCACAATCTTCAACTTCCACACCCACCACACAGAGCAAGGATTCTTCATATGGAAAAATGATTAAACCTTCTATGATCATTGATATAATAGTCTTGGCTTTGGCCTTTCTTCTCATTGCAATTCCAACAGGGTTTGTTAGCATTTATACATAA 591 0.3976 MKNHETRVHELISLSFFVLIVCGTLATVNGADDLATKCGQVVEKVIPCLSFATGKAATPTKECCDAATEIKESNPQCLCYIIQQTHKGSPQSKQMGIQEDKLLQLPSVCNVKNASISQCPKLLGLSPSSPDAAIFTNASKLTPTSSAQSSTSTPTTQSKDSSYGKMIKPSMIIDIIVLALAFLLIAIPTGFVSIYT* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1428 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 188 IPR043325 -
Lan3g1428 196 PRINTS Plant phospholipid transfer protein signature 37 53 IPR000528 GO:0006869|GO:0008289
Lan3g1428 196 PRINTS Plant phospholipid transfer protein signature 58 72 IPR000528 GO:0006869|GO:0008289
Lan3g1428 196 PRINTS Plant phospholipid transfer protein signature 96 113 IPR000528 GO:0006869|GO:0008289
Lan3g1428 196 SMART aai_6 38 119 IPR016140 -
Lan3g1428 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 119 IPR036312 -
Lan3g1428 196 CDD AAI_LTSS 47 111 - -
Lan3g1428 196 Gene3D - 35 117 IPR036312 -
Lan3g1428 196 MobiDBLite consensus disorder prediction 142 162 - -
Lan3g1428 196 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 14 188 - -
Lan3g1428 196 Pfam Probable lipid transfer 26 119 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1428 Lan-Chr3 25886656 25889199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1428 37 184 Acyl Lipid Metabolism Gene Families AT1G27950 48.667 2.86e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1428 - - gmx:100305718 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0026 15 176718 177589 Lan3g1428 3 25886656 25889199 LSH