Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0026 ATGAAGTACCATCAAAGTAGAGTTAATGAACTCATTTCCTTGTCCTTTGTTCTCATTGTGTGTGGAACATTAGCCACGGTTAATGGAGCAGACGATTTAGCCACGAAATGTGGGCAAGTCGTGGAGAAAGTAATTCCATGTTTGAACTTTGCGACGGGAAAAGCAGCAACACCAACAAAACAATGTTGTGATGCAGTTAATGATGAGATAAAAGAGAGTGACCCAGAATGTTTGTGTTACATAATTCTACAAACTCATAAGGGTAGCCCTCAAAGCAAGCAAATGGGGATTCAAGAGGATAAATTGCTTCAGCTTCCTTCTGCTTGTAATGTTAAAAATGCCAATATCACCCAATGCCCTAAACTTTTGGGTCTACCTCCAAACTCACCAGATGCTGCTATCTTTACAAATGCTTCAAAATTAAGTCCAACTGCATCCACTACTCAACCTTCAAATTCAACATCCTCTACACAGAGCAAGGATGGTTCCTATGGAAACATGATTAAACCTCCTATCATCACTCATATAATATTCTTGTCTTTGCCTTTTGTTCTTATTACAGTTCCAACCGGATTTGTTAGCATTTACATATGA 594 0.3872 MKYHQSRVNELISLSFVLIVCGTLATVNGADDLATKCGQVVEKVIPCLNFATGKAATPTKQCCDAVNDEIKESDPECLCYIILQTHKGSPQSKQMGIQEDKLLQLPSACNVKNANITQCPKLLGLPPNSPDAAIFTNASKLSPTASTTQPSNSTSSTQSKDGSYGNMIKPPIITHIIFLSLPFVLITVPTGFVSIYI* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0026 197 MobiDBLite consensus disorder prediction 142 163 - -
Lan15g0026 197 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 35 119 IPR036312 -
Lan15g0026 197 Pfam Probable lipid transfer 25 119 IPR016140 -
Lan15g0026 197 PRINTS Plant phospholipid transfer protein signature 36 52 IPR000528 GO:0006869|GO:0008289
Lan15g0026 197 PRINTS Plant phospholipid transfer protein signature 57 71 IPR000528 GO:0006869|GO:0008289
Lan15g0026 197 PRINTS Plant phospholipid transfer protein signature 96 113 IPR000528 GO:0006869|GO:0008289
Lan15g0026 197 CDD AAI_LTSS 46 111 - -
Lan15g0026 197 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 179 IPR043325 -
Lan15g0026 197 Gene3D - 34 117 IPR036312 -
Lan15g0026 197 SMART aai_6 37 119 IPR016140 -
Lan15g0026 197 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 15 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0026 Lan-Chr15 176718 177589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0026 36 185 Acyl Lipid Metabolism Gene Families AT1G27950 46.753 1.12e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0026 - - adu:107482371 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0026 15 176718 177589 Lan3g1428 3 25886656 25889199 LSH