Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1426 ATGGAAAGTGGTGGTGGTGGTGGTTTGTTGAATCAACTCATATCTCTCCTTCAACATTCTCTACATTCTTACAACAACAACTTCAACAACTCACAACAACAACAACAACAACAACACCAATTTCTTTCTTCTTCTTCTTCTTCTTTCATTCTTCATAATCATCATACTCTCATCCTTCCACCTCTTCCTACCAGATGGACCTCCCTTGATATTGAAGAGAGCTCCGTAAATGATTGCTGTAGCCTTGTAATGCCAGCTGGAAAGTCTGGTAGTTTCAGGATGGTGGAGCCTATAAAGCCTCCTCCTACCAAGAAATGTCGTAGAGATCGGAGCAGGGGCAAATCAACTGGAAGGTCCTGTGCAACTGAAGTTCTAGAACAACAAATTTGGAAAGCTTTTCCCCAAGATTTGTTTGAGGCTGTGATTGCACGACTTCCCGTTGCCACATTTTTCCGCTTCCGCTCTGTATGCCGGCAATGGAACTCTTTGCTGACTTCTCAAAGTTTTTCTCAGCTTTGTGCTCAAGTACCGCAACAACATCCCTGGTTTTACACCATAACTCATGAAAATGTGAATTCAGGAGCCATGTATGACCCTTCTTTGAAAAAATGGCATCATCCCACTATTTCAACACTACCCTCAAAATTGATCATTTTACCAGTGGCTTCTGCTGGGGGTCTGGTTTGCTTTCTCGACATTGGTCATCGAAACTTCTATGTTTGCAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTTAAAGTCTGGTCTCGTGTTGCTGTAGGGATGACCATAAACGGAAAGCCAACTGGTTCAGGCTACAAGATTCTGTGGGTGGGTTGTGATGGTGAGTATGAAGTTTACGACTCACTGAGAAATTCTTGGAGTCGTCCAGGAAGCTTGCCTGCAGGTATGAAGCTTCCTTTATCACTCAACTTTAGGTCACAAGCTGTCTCTATTGATAGCACACTTTACTTCATGCGTTCGGATCCAGAAGGGATTGTTTCTTACGATATGGCAACTGGGGTTTGGAAACAGTACATAATCCCAGTGCCATTGTATCTGACTGACCACACCCTGGCTGAGTGTGACGGCCAGATCATGCTCGTGGGTTTGCTCACGAAGAATGCGGCCACATGCGTATGCATATGGGAGCTGCAAAGAATGACACTATTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGAAAGCACGTTCGAATGACTTGCCTTGGAAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAACCGATTGGTTACTTACAACATAGCAAGTAAGGAATGGCTGAGGGTTCCTGGGTGCATGGTGCCATGTGGGAGAAAACGGCAATGGATAGCGTGTGGTACTGCATTTCATCCATGCCTAACTGCAACAGCTTGA 1440 0.4479 MESGGGGGLLNQLISLLQHSLHSYNNNFNNSQQQQQQQHQFLSSSSSSFILHNHHTLILPPLPTRWTSLDIEESSVNDCCSLVMPAGKSGSFRMVEPIKPPPTKKCRRDRSRGKSTGRSCATEVLEQQIWKAFPQDLFEAVIARLPVATFFRFRSVCRQWNSLLTSQSFSQLCAQVPQQHPWFYTITHENVNSGAMYDPSLKKWHHPTISTLPSKLIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTINGKPTGSGYKILWVGCDGEYEVYDSLRNSWSRPGSLPAGMKLPLSLNFRSQAVSIDSTLYFMRSDPEGIVSYDMATGVWKQYIIPVPLYLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQRMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIASKEWLRVPGCMVPCGRKRQWIACGTAFHPCLTATA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1426 479 SMART fbox_2 133 173 IPR001810 GO:0005515
Lan3g1426 479 SUPERFAMILY F-box domain 124 205 IPR036047 GO:0005515
Lan3g1426 479 ProSiteProfiles F-box domain profile. 127 172 IPR001810 GO:0005515
Lan3g1426 479 MobiDBLite consensus disorder prediction 92 118 - -
Lan3g1426 479 Gene3D - 169 469 IPR015915 GO:0005515
Lan3g1426 479 Pfam F-box domain 133 169 IPR001810 GO:0005515
Lan3g1426 479 PANTHER BNAA07G08860D PROTEIN 62 479 - -
Lan3g1426 479 PANTHER F-BOX/KELCH-REPEAT PROTEIN 62 479 - -
Lan3g1426 479 Gene3D - 130 168 - -
Lan3g1426 479 SUPERFAMILY Galactose oxidase, central domain 194 460 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1426 Lan-Chr3 25869472 25871655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1426 - - gmx:100810179 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1426 3 25869472 25871655 Lan12g0461 12 10788505 10791618 PCT
Lan12g0461 12 10788505 10791618 Lan3g1426 3 25869472 25871655 PCT