Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0461 ATGGAACAACAACAACAACATATGCCATTGCTCACTCACTTTCATCCCAGGCAGTTCTTCCTGGACATTGATAATAACTCTGTAGATAGCTGCAGTGACCTATCAATGACAGCTGGAAGTTTCAGAGTAATGGAGCTGCCAAAGCATCCATCTACTAAGAAGTCTCGAAGAAATCAGAGCAGAGGAAAATCATCTAGTAGGCCGTTTATGGATCAACAAGTATGGAAAGATTTTCCGGAAGATTTATTTGAGGCTGTGATTGCACGCCTTCCCATTGCCACATTTTTTCGTTTCCGCGCTGTATGCCAGCGATGGAATTCCTTGCTGACATCTAAAAGTTTTTCCCAGCACTGTGCTGAAGTCCCACAAGAAAACCCATGGTTTTACACAGTAACTCGTGAATGTTTGAATTCTGGAGTCATGTATGACCCTTCTGTGAAAAAATGGCATCATCACACTTTTTCAACCAGGCCTGTATTGTATGATATACCAGTGGCTTCTGCTGGTGGTCTCATTTGCTTTACTGGCTTTGATCATCGAGACTACTGTGTCTGTAACCCATTAACTCAATCATTCACAGAGTTACCAATTCGGCCAATTAAGTCCCATTCCCAGTGTTGCCGTGCTGTAGGGATGACAGTAAATGGGAACTCAACTGATGCAGGCTACAAGATCCTATTGGTAAATGCTAATGGAGATTATGAAATTTATGACTCGTTGAGAAAGTCTTGGAGCCATCAAGGAAACATGCCTGCTAGTATCAAGCGCCCGATGACAGTCAACTTTGGTTCACGTGTTTCGATTGACAGCACAATTTACTTCACACGTTCATACCCAGAAGCGATTATATCCTATGATATGGCAACTGAGGTTTGGAAACAGAACATAACCCCATTGCCATCTCATGTGATTGACCACGCGCTGGCTGAGTATAATGGCCGGATTATGCTCGTGGGGTTGCTTGGGAAGAATGCAGCCACATGTGTTTGCATATGGGAGCTGCAGCAGATGACACTCTTGTGGAAGGAGGTTGACAGAATGCCAAATGAATGGTGCTTGGATTTTTATGGGAAGGCCGTTATGATGAAGTGCTTGGGGAACAAAGGTGGCTTGCTCATGTTGTCCTTGCGATCAACATTCTCCATGACATCAGTATTAGTGAATCGCTTGGTTAGTTACAACATGGCAAGTAGGGAATGGCTGCAGGTTCCTACATGTAAGGTGCCAGGTGGAAGAAAAAGGCAATGGGTATCATATGGTACTGCATTCTATCCATCCCTAACTTCAACGGCTTGA 1296 0.4398 MEQQQQHMPLLTHFHPRQFFLDIDNNSVDSCSDLSMTAGSFRVMELPKHPSTKKSRRNQSRGKSSSRPFMDQQVWKDFPEDLFEAVIARLPIATFFRFRAVCQRWNSLLTSKSFSQHCAEVPQENPWFYTVTRECLNSGVMYDPSVKKWHHHTFSTRPVLYDIPVASAGGLICFTGFDHRDYCVCNPLTQSFTELPIRPIKSHSQCCRAVGMTVNGNSTDAGYKILLVNANGDYEIYDSLRKSWSHQGNMPASIKRPMTVNFGSRVSIDSTIYFTRSYPEAIISYDMATEVWKQNITPLPSHVIDHALAEYNGRIMLVGLLGKNAATCVCIWELQQMTLLWKEVDRMPNEWCLDFYGKAVMMKCLGNKGGLLMLSLRSTFSMTSVLVNRLVSYNMASREWLQVPTCKVPGGRKRQWVSYGTAFYPSLTSTA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0461 431 Pfam F-box domain 75 114 IPR001810 GO:0005515
Lan12g0461 431 MobiDBLite consensus disorder prediction 45 68 - -
Lan12g0461 431 SUPERFAMILY Galactose oxidase, central domain 139 411 IPR011043 -
Lan12g0461 431 PANTHER F-BOX/KELCH-REPEAT PROTEIN 25 430 - -
Lan12g0461 431 SUPERFAMILY F-box domain 67 123 IPR036047 GO:0005515
Lan12g0461 431 PANTHER BNAA07G08860D PROTEIN 25 430 - -
Lan12g0461 431 SMART fbox_2 78 118 IPR001810 GO:0005515
Lan12g0461 431 TIGRFAM F_box_assoc_1: F-box protein interaction domain 169 335 IPR017451 -
Lan12g0461 431 Gene3D - 113 419 IPR015915 GO:0005515
Lan12g0461 431 ProSiteProfiles F-box domain profile. 72 117 IPR001810 GO:0005515
Lan12g0461 431 Gene3D - 75 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0461 Lan-Chr12 10788505 10791618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0461 - - gmx:100810179 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1426 3 25869472 25871655 Lan12g0461 12 10788505 10791618 PCT
Lan12g0461 12 10788505 10791618 Lan3g1426 3 25869472 25871655 PCT