Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1286 ATGGACTCTCTCTCTCTCTTCTGCACCGGCGCTCTCATCGCCGGCGGCCTCTACTGGTTCGTCTGTATTCTCGGCCCCGCCGAACAGAAAGGAAAACGCGCCACTGATCTCTCCGGCGGCTCCATCTCCGCCGAGAAAGTCCGTGACAACTACAACAGCTACTGGTCCTTCTTCCGCCGCCCTAAGGAGATCGAAACCGCCGAGAAAGTTCCCGATTTCGTCGACACCTTCTACAACCTCGTTACCGACATCTACGAGTGGGGTTGGGGCCAGTCCTTCCATTTCTCCCCTTCCATCCCTGGGAAATCCCACCGTGACGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTGATCGAAGCTAAACCTGGACACAAGATCCTGGACGTAGGTTGCGGCGTTGGTGGTCCCATGCGTGCAATCGCATCCCACTCGCGCGCAAACGTGGTGGGAATCACGATCAACGAGTACCAAGTAAACAGAGCGAAATTACACAACAAAAAAGCAGGTCTCGACGCGCTCTGTGAGGTCGTGTGTGGAAACTTCCTGGAGATGCCGTTCGCGGATAACAGCTTCGACGGCGCGTACTCAATCGAAGCCACATGTCACGCGCCGAAGCTCGAAGAGGTATACGCTGAGATATTTAGGGTTTTGAAGCCAGGTTCTCTTTACGTTTCTTACGAGTGGGTGACGACAGACAAGTACAATTGTGATAATGCGGAACACGTGGCAGTCATTCAGGGAATAGAAAGAGGTGACGCTTTACCAGGGCTAAGAAGCTACGATGATATTGCTGAGTCAGCAAAGAAGGTTGGGTTCGAAGTGGTTAAAGAGAAAGATCTGGCTAAACCACCGGCTCAACCATGGTGGAGCCGGTTGAAGATGGGTCGAGTCGCTTATTGGAGGAACCACATTGTGGTTACAATTCTAGCTGCATTGGGAATCGCACCAAAAGGAACCGTTGATGTTCATGAAATGTTGTTTCACACTGCTGATCATTTAACTCGTGGGGGTGAAACCGGTATTTTCTCTCCTATGCACATGATCCTTTGCAAAAAGCCTCATTCATCATAA 1074 0.5196 MDSLSLFCTGALIAGGLYWFVCILGPAEQKGKRATDLSGGSISAEKVRDNYNSYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKPGHKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRAKLHNKKAGLDALCEVVCGNFLEMPFADNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGSLYVSYEWVTTDKYNCDNAEHVAVIQGIERGDALPGLRSYDDIAESAKKVGFEVVKEKDLAKPPAQPWWSRLKMGRVAYWRNHIVVTILAALGIAPKGTVDVHEMLFHTADHLTRGGETGIFSPMHMILCKKPHSS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1286 357 PANTHER - 1 355 IPR044625 GO:0008168|GO:0032259
Lan3g1286 357 CDD AdoMet_MTases 126 230 - -
Lan3g1286 357 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Lan3g1286 357 Gene3D Vaccinia Virus protein VP39 44 310 IPR029063 -
Lan3g1286 357 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Lan3g1286 357 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 355 - -
Lan3g1286 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Lan3g1286 357 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1286 Lan-Chr3 24863484 24864864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1286 116 221 Acyl Lipid Metabolism Gene Families AT1G73600 33.019 7.27e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1286 K08242 - gmx:100791154 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1223 15 20616127 20617397 Lan3g1286 3 24863484 24864864 LSH
Lan14g0961 14 15971331 15994905 Lan3g1286 3 24863484 24864864 LSH