Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1223 ATGGACTCTCTCTCTCTCTTCTGCACCGCCGCTCTCCTCGCCGGCGGCCTCTACTGGTTCGTCTGCATTCTCGGCCCCGCCGAACAGAAGGGCAAACGCGCCACCGATCTCTCTGGTGGCTCCATCTCTGCCGAGAAAGTCCGCGACAACTACAATAACTACTGGTCCTTCTTTCGCCGCCCCAAGGAGATCGAAACCGCCGACAAGGTCCCCGACTTCGTCGACACCTTCTACAACCTCGTCACCGACATCTACGAGTGGGGTTGGGGACAGTCCTTCCATTTCTCTCCTTCCATCCCCGGGAAATCCCACCGTGATGCCACGCGCCTCCATGAAGAGATGGCCGTCGATCTCATCGAGGCCAAACCTGGACACAAGATCCTCGATGTAGGTTGCGGCGTTGGTGGGCCCATGCGTGCAATAGCATCCCACTCGCGCGCAAACGTCGTGGGAATCACGATCAACGATTACCAAGTCAACAGAGCCAAATTGCACAACAAAAAAGCAGGCCTTGATTCTCTCTGCGAGGTTGTGTGTGGTAATTTCCTCGAGATGCCGTTTCAAGACAACAGTTTCGACGGCGCGTACTCGATCGAAGCCACATGTCACGCGCCCAAACTCGAAGAGGTATACGCTGAGATCTTTAGGGTTTTGAAACCTGGTAGTCTTTACGTTTCTTACGAGTGGGTGACGACAGACAAGTACAATTGTGATAACGATGAACACGTGGCAGTCATTCAGGGTATAGAGAGGGGTGACGCTTTACCTGGGCTAAGGAGCTACAGTGATATTGCTGAAACAGCTAAGAAGGTTGGGTTCGAGGTTGTGAAAGAGAAAGATCTGGCTGAACCACCGGCTCAACCGTGGTGGACCCGGTTGAAGATGGGTCGAGTCGCTTATTGGAGGAACCACATTGTTGTAACTATTCTCGCTGCTTTGGGAATTGCACCTAAAGGAACCGTTGATGTTCATGAAATGTTGTTTCACACTGCTGATCATTTGACACGTGGAGGTGAATCTGGTATTTTCACTCCGATGCATATGATTCTTTGCAGAAAACCATTTCATTCATCATCTTAG 1080 0.5157 MDSLSLFCTAALLAGGLYWFVCILGPAEQKGKRATDLSGGSISAEKVRDNYNNYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKPGHKILDVGCGVGGPMRAIASHSRANVVGITINDYQVNRAKLHNKKAGLDSLCEVVCGNFLEMPFQDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGSLYVSYEWVTTDKYNCDNDEHVAVIQGIERGDALPGLRSYSDIAETAKKVGFEVVKEKDLAEPPAQPWWTRLKMGRVAYWRNHIVVTILAALGIAPKGTVDVHEMLFHTADHLTRGGESGIFTPMHMILCRKPFHSSS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1223 359 Gene3D Vaccinia Virus protein VP39 44 311 IPR029063 -
Lan15g1223 359 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Lan15g1223 359 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Lan15g1223 359 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Lan15g1223 359 CDD AdoMet_MTases 126 230 - -
Lan15g1223 359 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 358 - -
Lan15g1223 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Lan15g1223 359 PANTHER - 1 358 IPR044625 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1223 Lan-Chr15 20616127 20617397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1223 116 221 Acyl Lipid Metabolism Gene Families AT1G73600 33.019 1.81e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1223 K08242 - pvy:116123849 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1223 15 20616127 20617397 Lan14g0961 14 15971331 15994905 LSH
Lan15g1223 15 20616127 20617397 Lan3g1286 3 24863484 24864864 LSH