Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1122 ATGGAACTTATTGATGATAGGTGTGGTCAAGGTTTGAAGAGAAAGACACCAGAAAATGGAAATTATGAACTCCTCAACAACTTTTTTCTGGATGATCTTAATGAAGATCTCCTTGAAAGGATACTTTCATGGCTTCCGACATCGACATTCTTTCGCCTTACTTCCTTGTGCAAAAGATGGAAATCAGTTGCTTCTTCTTCAAGTTTCAAGCTTGCTTGCTCTCACATTCCTTCAAGAGAACCTTGGTTTCTAATGGTTGCTCCTAACCAAAACCAACCTGTCATATTTGACTCTGCCCAAAGCACTTGGAAAAGGCTCAATCACCCTCCTCTTCTGCAAGAAGAGTCTAACCAAAGTTGCATGCCAGTTGCAGCCTCTGGTGGCTTGATTTGCTACCGTAATTTAGCCGGAAACTTCGTTGTATCCAATCCTGTCACTGGATCTTGCATTGAACTCCCTCCACTGCATTTTGCCTCACAACAACATCAACCTCTCAATGCCATAGTGATGAGCACATTTTCCAAAGACCAACTCTCATACAAAATTGTGTTAGTCTTTGGTGAACTTCCAAATCTTATGTTTAAAGTCTACAATTCAAATTCTGGCTGTTGGCAAGATGAGGCTGCATTAAGGAGAAGGGTTGATGATAATTCACTGGAATATGATTCATCTGATGACAATGTTGTATACTTCCTCAGTAAGGCTGGAACTGTGGTTGCAAGCAACATGCAGAGAAGTCCATCTAAGCAATATTCATCGGTTATTACTACTAACAAAGACGGCGAAGAAGTCGTGCATTTTCTTAGCTCCTCCGGGAAAGTAGTAGCTTGCAATTTGACATGCAACTGCTTCTTGGAGTACCCGAGGTTATTGCCTGTATTCAGTGAGTATTCCATTGACATAGTAGAGTGCAATGGCGAGATGTTAGTTGTTTTGTTATCGGAGTTCCTCGAAAGCGCGAGTCTAAGGGTGTGGAAATATGATGAGGATAATAGAGGGTGGCACCAGATTGCTGCAATGCCTGCAGCAATGTCTCATGATTGGTATGGAAAGAAGGCTGATATTAACTGTGTTGGTGCTGGTAACCAGATATTCATATGCTTGAACTTTTCTGAGCTATGCAGTTATATTCTGTGTGATTTGGTGAACAACAAGTGGGTTGAATTGCCAAATTGTTGCATAAATGGCCAAGTCATGGACTTCATGTCTGCATTTTCATTTGAGCCAAGGATAGAGGCTTCTGTATGA 1248 0.4143 MELIDDRCGQGLKRKTPENGNYELLNNFFLDDLNEDLLERILSWLPTSTFFRLTSLCKRWKSVASSSSFKLACSHIPSREPWFLMVAPNQNQPVIFDSAQSTWKRLNHPPLLQEESNQSCMPVAASGGLICYRNLAGNFVVSNPVTGSCIELPPLHFASQQHQPLNAIVMSTFSKDQLSYKIVLVFGELPNLMFKVYNSNSGCWQDEAALRRRVDDNSLEYDSSDDNVVYFLSKAGTVVASNMQRSPSKQYSSVITTNKDGEEVVHFLSSSGKVVACNLTCNCFLEYPRLLPVFSEYSIDIVECNGEMLVVLLSEFLESASLRVWKYDEDNRGWHQIAAMPAAMSHDWYGKKADINCVGAGNQIFICLNFSELCSYILCDLVNNKWVELPNCCINGQVMDFMSAFSFEPRIEASV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1122 415 SUPERFAMILY Galactose oxidase, central domain 90 343 IPR011043 -
Lan3g1122 415 SUPERFAMILY F-box domain 25 91 IPR036047 GO:0005515
Lan3g1122 415 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 24 415 - -
Lan3g1122 415 SMART fbox_2 33 73 IPR001810 GO:0005515
Lan3g1122 415 Gene3D - 19 69 - -
Lan3g1122 415 PANTHER F-BOX/KELCH-REPEAT PROTEIN 24 415 - -
Lan3g1122 415 Pfam F-box domain 30 70 IPR001810 GO:0005515
Lan3g1122 415 ProSiteProfiles F-box domain profile. 27 72 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1122 Lan-Chr3 23559779 23561388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1122 - - gmx:100786481 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1072 15 19726892 19729521 Lan3g1122 3 23559779 23561388 LSH
Lan14g0837 14 15129781 15132284 Lan3g1122 3 23559779 23561388 LSH