Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1072 ATGGAACGAAATGATGATGGGCATGGTCAAAGTTTGAAGAGAAAGTCACCAGAAAATGGAAATCATGAACTCCTCAACAACTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGGTACTTTCATGGCTGCCAACTTCCACATTCTTTCGCCTTACTTCTGTGTGCAAAAGGTGGAAATCTGTTGCTGCCTCTTCAAGTTTCAAACTTGCTTGCTCTCACATTCCTTCAAGGGAACCTTGGTTTCTAATGGTTGCTCCTAATCTTAATCAATCAATTATATTTGACTCTGCTGAAAGCACTTGGAAAAGGCTCAATCACCCTCCTCTTCTGCATGAAGAGTCTAACCAAAGTTTCATGCCGGTTGCAGCCTCCGGCGGCTTGATTTGCCACCGTAAATTATCTGGAAACTTCATTGTTTCCAATCCTGTGACAGGATCCTGTAGTGAACTCCCTCCACTGAATTTTGCCTCACAGCACCAACCTCTCAATGCCATAGTGATGAGCACTGTTTCCAAAGACCAACTCTCATACAAAATTGTGTTAGTCTTTGGTGAACTTCCAAATCTTTGGTTTAATGTCTACAATGCAAGCTCCGGCTGTTGGGAAGATGTGGTCGCAATGAAGAGAAACGTCGACGACGATTCAGTGGAAAATGATTCAACTGATGACAATGCTGTATACTTCCTCAGCAAGGCTGGAACTGTGGTTGTAAGCAACATGCAAAGAAGTCCATCAAAGCAATATTCATCAGTTATTACTACTAACAAAGATGGCGAAGAAGTCATCTTTTTTCTCAGCTCCTCGGCCAAACTGATAGCTTGCAATTTGACAAGCAAGTGCTTCTTTGAATATCCTAGGTTGTTGCCTGTTCTCAGTGAGTATTCCATTGATGTTGTGGAGTGCAACGGCGAGATGCTAGTTGTTTTGTTATCGGAATTTTTCGAAACCGCGAGTTTAAGGGTCTGGAAATATGATGAGGCTAACAGAGGGTGGAACCAGATTGCTGCAATGCCAGCAGCAATGTCTCATGAGTGGCATGGAAAGAAAGCAGATATTAACTGTGTTGGGTCTGGTAGCCAGATATTCATATGCTTGAACTCCACTGAGCTATGTACTTATGTTCTGTGTGATTTGGTTACAAACAAGTGGTTTGAATTGCCAAAATGTTGCATAAATGGCCAAGTCATGGACTTCATGTCTGCATTTTCATTTGAGCCAAGGATAGAGGCTTCTGTATGA 1245 0.4217 MERNDDGHGQSLKRKSPENGNHELLNNFSLDDLNEDLFERVLSWLPTSTFFRLTSVCKRWKSVAASSSFKLACSHIPSREPWFLMVAPNLNQSIIFDSAESTWKRLNHPPLLHEESNQSFMPVAASGGLICHRKLSGNFIVSNPVTGSCSELPPLNFASQHQPLNAIVMSTVSKDQLSYKIVLVFGELPNLWFNVYNASSGCWEDVVAMKRNVDDDSVENDSTDDNAVYFLSKAGTVVVSNMQRSPSKQYSSVITTNKDGEEVIFFLSSSAKLIACNLTSKCFFEYPRLLPVLSEYSIDVVECNGEMLVVLLSEFFETASLRVWKYDEANRGWNQIAAMPAAMSHEWHGKKADINCVGSGSQIFICLNSTELCTYVLCDLVTNKWFELPKCCINGQVMDFMSAFSFEPRIEASV* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1072 414 SMART fbox_2 33 73 IPR001810 GO:0005515
Lan15g1072 414 Gene3D - 23 70 - -
Lan15g1072 414 SUPERFAMILY Kelch motif 89 391 IPR015915 GO:0005515
Lan15g1072 414 Pfam F-box domain 30 69 IPR001810 GO:0005515
Lan15g1072 414 MobiDBLite consensus disorder prediction 1 20 - -
Lan15g1072 414 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 23 414 - -
Lan15g1072 414 SUPERFAMILY F-box domain 25 86 IPR036047 GO:0005515
Lan15g1072 414 PANTHER F-BOX/KELCH-REPEAT PROTEIN 23 414 - -
Lan15g1072 414 ProSiteProfiles F-box domain profile. 27 72 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1072 Lan-Chr15 19726892 19729521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1072 - - gmx:100786481 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1072 15 19726892 19729521 Lan14g0837 14 15129781 15132284 LSH
Lan15g1072 15 19726892 19729521 Lan3g1122 3 23559779 23561388 LSH