Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1113 ATGGCGTTTTGGAGATCTATCGCTTTCTCTGCACTTCTCGCTCTGCTTTTCATCCATGATTCTCACTGTTTCTATCTCCCTGGTGTTGCTCCACAGGACTTCAACAAGGGAGATTTATTGCAAGTGAAAGTAAACAAATTAACATCAATAAAGACCCAGCTTCCATACACATATTATTCACTCCCTTATTGTAGCCCACCAAAAATACAGGACAGTGCAGAAAATCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTACGCGTTTAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAATCGCAAACTTGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAATGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCTCTTAAAAGGAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAAGAGCAGAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATTTGCAAACGGACTCTACCAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTAAAACATGAATATGAAGGTAAGTGGGATGAAAAGACTCGTTTGACAACCTGTGACCCTCACGCTAAACACACAGTTCTCAACTCCAATACTCCCCAAGAGGTTGAAGAGAACCAAGAAATCATCTTCACTTATGATGTTGATTTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTATTCCTTTCGGGTATGGTGGCAATGATAATGCTGCGGACATTGTACCGGGATATTTCAAGGTACAATGAGCTTGAGACCCAAGAAGAAGCTCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTGTTTAGGCCCCCTCAGAACTCAGACCTGCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGTTACTAGTAACCATGATATTTGCAATCCTCGGGTTCCTATCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGACTTTTTGCTGGTTACGCCTCAACTCGCTTATACAAAATGTTCAAAGGATCTGAATGGAAGAAAATTGCCTTCAGGACCGCAGTCTTCTTCCCAGCCTCTGTCTCTGTCATTTTTGCTGTATTGAACACTTTAATATGGGGCCAAAAATCATCCGGAGCTGTGCCATTTGGTACCATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCAGTCCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCAGTGAAGACAAACAAAATCCCAAGGCAGATCCCGGAGCAGGCCTGGTACATGAACCCAGCCTTCTCAGTTCTTATCGGGGGGATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGGTTCCTCTTTTTGGTCTTCATCATCCTCATCATCACATGTGCTGAGATAACCGTTGTGCTATGCTACTTTCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGATCATACCTCACATCCGGTTCTTCTGCACTTTACCTATTTCTTTACGCAACATTTTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCCGTATTATACTTTGGGTACATGCTGATAGCTTCTTATGCATTCTTCGTGGTGACCGGTACTATCGGATTTTATGCATGCTTTTGGTTCACAAGGCTGATCTACTCCTCAGTCAAAATTGATTAG 1911 0.4218 MAFWRSIAFSALLALLFIHDSHCFYLPGVAPQDFNKGDLLQVKVNKLTSIKTQLPYTYYSLPYCSPPKIQDSAENLGEVLRGDRIENSLYAFKMREPQMCNVVCNRKLDAKTAKEFKEKINDEYRVNMILDNLPLVVPLKRNDQDSTVYQLGFHVGLKGQYSGSKEQKFFIHNHLAFTVKYHRDLQTDSTRIVGFEVKPFSVKHEYEGKWDEKTRLTTCDPHAKHTVLNSNTPQEVEENQEIIFTYDVDFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYNELETQEEAQEETGWKLVHGDVFRPPQNSDLLCVYVGTGVQFFGMLLVTMIFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYASTRLYKMFKGSEWKKIAFRTAVFFPASVSVIFAVLNTLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAVLYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1113 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 636 IPR004240 GO:0016021
Lan3g1113 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016021
Lan3g1113 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1113 Lan-Chr3 23482781 23486860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1113 11 636 Miscellaneous Gene Families AT5G10840 86.465 0.0 1111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1113 K17086 - gmx:100780976 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1113 3 23482781 23486860 Lan3g1113 3 23482781 23486860 ECH
Lan15g1062 15 19670160 19673986 Lan3g1113 3 23482781 23486860 LSH
Lan14g0829 14 15071578 15075481 Lan3g1113 3 23482781 23486860 LSH
Lan3g1113 3 23482781 23486860 Lan15g1062 15 19670160 19673986 PCT
Lan3g1113 3 23482781 23486860 Lan14g0829 14 15071578 15075481 PCT
Lan3g1113 3 23482781 23486860 Lan3g1113 3 23482781 23486860 PCT
Lan15g1062 15 19670160 19673986 Lan3g1113 3 23482781 23486860 PCT
Lan14g0829 14 15071578 15075481 Lan3g1113 3 23482781 23486860 PCT