Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1062 ATGGCGTTATGGAGATCTATCGTTTTTTCTTCACTTCTTTCTCTTCTTTTCATCCATGTCGCTCATTCCTTCTACCTCCCTGGTGTTGCTCCACAAGACTTTCAAAAGGGAGATTTGTTGCAAGTGAAAGTAAACAAATTAACATCGATAAAGACACAGCTTCCATATACATATTATTCCCTCCCTTATTGTAACCCAGCAAAAATACAGGATAGTGCAGAAAATCTCGGGGAAGTGCTTCGTGGTGACCGCATTGAGAATTCTCTTTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAATCGTAAACTTGATGCCAAAGCTGCTAAGGAGTTCAAAGAGAAGATCAATGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTGCCTATAAAAAGGAGTGATCAGGATTTGACTGTTTATCAGCTGGGTTTCCATGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAAGAGGAGAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAAAGATATTCAAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTAAAACATGAATATGAAGGTAAATGGGATGAAAAGACTCGTTTGACAACTTGTGACCCTCATGCTAAACACACAGTTGTCAACTCCAATACTCCCCAAGAGGTTGAAGAGAACCAGGAAATCATATTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCTTATTTGCTAATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCTGGCATGGTGGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCAAAGTACAATGATCTTGAAACCCAAGAAGAAGCTCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTCTTTAGGGCTCCTCAGAACTCAGACCTGCTCTGTGTTTATGTCGGAACTGGTATTCAGTTTTTTGGGATGATACTAGTAACCATGATCTTTGCCATCCTTGGGTTCCTTTCTCCTTCGAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGACTTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATGTTCAAAGGGTCAGAGTGGAAAAAAATTGCCTTCAGGACTGCAATCTTGTTCCCTGCTTCTGTCTCTGCCATTTTCGCTGTATTAAACACTTTAATATGGGGGCAGAAATCATCTGGAGCTGTTCCATTTGGTACCATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCAGTTCCACTTGTTTTTGTGGGGAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCAGTGAAGACGAACAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCCTTCTCAGTTCTGATCGGTGGGATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATACTCACATCGATCTGGTTGAATCAGTTTTACTACATTTTCGGATTTCTCTTTTTGGTCTTCATCATCCTCATCATCACATGTGCTGAGATAACCATTGTGCTTTGCTACTTCCAGCTGTGCAGTGAAGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCTGGTTCTTCTGCACTATATCTATTTCTTTATGCAACATTTTACTTCTTCACCAAGCTTGAAATCACGAAGTTGGTATCTGCGATATTATACTTTGGATACATGCTTATAGCTTCTTACGCGTTCTTTGTGGTGACTGGTACTATTGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATATACTCCTCGGTGAAAATTGACTAG 1911 0.4113 MALWRSIVFSSLLSLLFIHVAHSFYLPGVAPQDFQKGDLLQVKVNKLTSIKTQLPYTYYSLPYCNPAKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCNRKLDAKAAKEFKEKINDEYRVNMILDNLPLVVPIKRSDQDLTVYQLGFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHKDIQTESARIVGFEVKPFSVKHEYEGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENQEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNDLETQEEAQEETGWKLVHGDVFRAPQNSDLLCVYVGTGIQFFGMILVTMIFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYASTRLYKMFKGSEWKKIAFRTAILFPASVSAIFAVLNTLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1062 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016021
Lan15g1062 636 SUPERFAMILY MFS general substrate transporter 274 460 IPR036259 -
Lan15g1062 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 6 636 - -
Lan15g1062 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 6 636 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1062 Lan-Chr15 19670160 19673986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1062 11 636 Miscellaneous Gene Families AT5G10840 85.987 0.0 1111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1062 K17086 - gmx:100780976 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1062 15 19670160 19673986 Lan14g0829 14 15071578 15075481 LSH
Lan15g1062 15 19670160 19673986 Lan3g1113 3 23482781 23486860 LSH
Lan3g1113 3 23482781 23486860 Lan15g1062 15 19670160 19673986 PCT
Lan15g1062 15 19670160 19673986 Lan3g1113 3 23482781 23486860 PCT